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    RPS3A ribosomal protein S3A [ Canis lupus familiaris (dog) ]

    Gene ID: 403677, updated on 5-Mar-2024

    Summary

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    Gene symbol
    RPS3A
    Gene description
    ribosomal protein S3A
    See related
    Ensembl:ENSCAFG00845005765
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 15
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (49742595..49746972)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (49404642..49409019)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (49429825..49434209)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (49011324..49015708)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (49104917..49109293)

    Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L39-like Neighboring gene uncharacterized LOC102151307 Neighboring gene small nucleolar RNA SNORD73 Neighboring gene small nucleolar RNA SNORD73 Neighboring gene SH3 domain containing 19 Neighboring gene serine protease 27 Neighboring gene serine protease 48

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A method for the large-scale cloning of nuclear proteins and nuclear targeting sequences on a functional basis. Pichon B, et al. Anal Biochem, 2000 Sep 10. PMID 10964405

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S3a
    XP_005629388.1
    XP_038352547.1
    XP_038414941.1
    XP_038478870.1
    XP_038544534.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051819.1 Reference ROS_Cfam_1.0

      Range
      49742595..49746972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038688606.1 → XP_038544534.1  40S ribosomal protein S3a

      UniProtKB/TrEMBL
      A0A8I3MUG5, A0A8P0NAA5, A0A8P0TSC6
      Related
      ENSCAFP00845007958.1, ENSCAFT00845010212.1
      Conserved Domains (1) summary
      pfam01015
      Location:21 → 221
      Ribosomal_S3Ae; Ribosomal S3Ae family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049275.1 Alternate UMICH_Zoey_3.1

      Range
      49011324..49015708
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038496619.1 → XP_038352547.1  40S ribosomal protein S3a

      Conserved Domains (1) summary
      pfam01015
      Location:21 → 221
      Ribosomal_S3Ae; Ribosomal S3Ae family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

      Range
      49104917..49109293
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038622942.1 → XP_038478870.1  40S ribosomal protein S3a

      Conserved Domains (1) summary
      pfam01015
      Location:21 → 221
      Ribosomal_S3Ae; Ribosomal S3Ae family

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

      Range
      49429825..49434209
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038559013.1 → XP_038414941.1  40S ribosomal protein S3a

      UniProtKB/TrEMBL
      A0A8I3MUG5, A0A8P0NAA5, A0A8P0TSC6
      Conserved Domains (1) summary
      pfam01015
      Location:21 → 221
      Ribosomal_S3Ae; Ribosomal S3Ae family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      49404642..49409019
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005629331.4 → XP_005629388.1  40S ribosomal protein S3a

      See identical proteins and their annotated locations for XP_005629388.1

      UniProtKB/TrEMBL
      A0A8I3MUG5, A0A8P0NAA5, A0A8P0TSC6
      Conserved Domains (1) summary
      pfam01015
      Location:21 → 221
      Ribosomal_S3Ae; Ribosomal S3Ae family
    Nucleotide Protein
    Heading Accession and Version

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