plrg1 pleiotropic regulator 1 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: plrg1provided by Xenbase
Official Full Name: pleiotropic regulator 1provided by Xenbase
Primary source: Xenbase:XB-GENE-964754
See related: Ensembl:ENSXETG00000022434
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 1

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	1	NC_030677.2 (54553625..54572279)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	1	NC_030677.1 (45311844..45330751)

Chromosome 1 - NC_030677.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within mRNA splicing, via spliceosome	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: pleiotropic regulator 1

Names: pleiotropic regulator 1 (PRL1 homolog)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001037254.1 → NP_001032331.1 pleiotropic regulator 1

See identical proteins and their annotated locations for NP_001032331.1

Status: PROVISIONAL

Source sequence(s)

CR760326

UniProtKB/TrEMBL

A0A803KJQ0, F6RX98, Q28IM0

Related

ENSXETP00000048552.5, ENSXETT00000048552.5

Conserved Domains (3) summary

COG2319
Location:196 → 492

WD40; WD40 repeat [General function prediction only]

cd00200
Location:199 → 493

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:212 → 247

7WD40; WD40 repeat [structural motif]