U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    NCU05427 ATP-dependent Clp protease [ Neurospora crassa OR74A ]

    Gene ID: 3879398, updated on 16-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    NCU05427
    Gene description
    ATP-dependent Clp protease
    Locus tag
    NCU05427
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Neurospora crassa OR74A (strain: OR74A)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    other: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_026502.1 (1603891..1606577, complement)

    Linkage Group II - NC_026502.1Genomic Context describing neighboring genes Neighboring gene tricarboxylic acid-7 Neighboring gene WD repeat protein Neighboring gene 1,4-alpha-glucan branching enzyme Neighboring gene ATPase-2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_026502.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The genome sequence of the filamentous fungus Neurospora crassa. Galagan JE, et al. Nature, 2003 Apr 24. PMID 12712197

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Names
    ATP-dependent Clp protease
    ATP-dependent Clp protease, variant

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_026502.1 Reference assembly

      Range
      1603891..1606577 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011395277.1 → XP_011393579.1  ATP-dependent Clp protease, variant [Neurospora crassa OR74A]

      See identical proteins and their annotated locations for XP_011393579.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9P5P1, V5IN31
      Conserved Domains (2) summary
      smart01086
      Location:481 → 552
      ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein
      pfam07724
      Location:216 → 425
      AAA_2; AAA domain (Cdc48 subfamily)

    2. XM_011395276.1 → XP_011393578.1  ATP-dependent Clp protease [Neurospora crassa OR74A]

      See identical proteins and their annotated locations for XP_011393578.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0B0DX01, Q9P5P1, V5IPV9
      Conserved Domains (3) summary
      smart01086
      Location:509 → 580
      ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein
      TIGR00390
      Location:86 → 580
      hslU; ATP-dependent protease HslVU, ATPase subunit
      pfam07724
      Location:244 → 453
      AAA_2; AAA domain (Cdc48 subfamily)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials