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    RPS12 ribosomal protein S12 [ Bos taurus (cattle) ]

    Gene ID: 326582, updated on 5-Mar-2024

    Summary

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    Official Symbol
    RPS12provided by VGNC
    Official Full Name
    ribosomal protein S12provided by VGNC
    Primary source
    VGNC:VGNC:56365
    See related
    BGD:BT29832; Ensembl:ENSBTAG00000001360
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (70976878..70980384)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101906317 Neighboring gene small nucleolar RNA SNORD101 Neighboring gene small nucleolar RNA SNORD100 Neighboring gene small nucleolar RNA SNORA33 Neighboring gene solute carrier family 18 member B1 Neighboring gene uncharacterized LOC104969595 Neighboring gene EYA transcriptional coactivator and phosphatase 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of gene expression profiles in early bovine pregnancy using a custom cDNA microarray. Ishiwata H, et al. Mol Reprod Dev, 2003 May. PMID 12658628
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small ribosomal subunit protein eS12
    Names
    40S ribosomal protein S12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014387.2 → NP_001014409.1  small ribosomal subunit protein eS12

      See identical proteins and their annotated locations for NP_001014409.1

      Status: PROVISIONAL

      Source sequence(s)
      AY528251
      UniProtKB/Swiss-Prot
      A1XED7, Q76I81, Q862U6
      UniProtKB/TrEMBL
      A0A3Q1MSH8
      Conserved Domains (1) summary
      pfam01248
      Location:16 → 111
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      70976878..70980384
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005210931.4 → XP_005210988.1  small ribosomal subunit protein eS12 isoform X1

      See identical proteins and their annotated locations for XP_005210988.1

      UniProtKB/Swiss-Prot
      A1XED7, Q76I81, Q862U6
      UniProtKB/TrEMBL
      A0A3Q1MSH8
      Conserved Domains (1) summary
      pfam01248
      Location:16 → 111
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

    2. XM_005210930.5 → XP_005210987.1  small ribosomal subunit protein eS12 isoform X1

      See identical proteins and their annotated locations for XP_005210987.1

      UniProtKB/Swiss-Prot
      A1XED7, Q76I81, Q862U6
      UniProtKB/TrEMBL
      A0A3Q1MSH8
      Related
      ENSBTAP00000001791.3, ENSBTAT00000001791.4
      Conserved Domains (1) summary
      pfam01248
      Location:16 → 111
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q76I81.1 GenPept UniProtKB/Swiss-Prot:Q76I81

    Gene LinkOut

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