Official Symbol

Cd3eprovided by RGD

Official Full Name

CD3 molecule, epsilon polypeptideprovided by RGD

Primary Source

RGD:1309222

See related

Ensembl:ENSRNOG00000016069

Gene type

protein coding

RefSeq status

PROVISIONAL

Organism

Rattus norvegicus

Lineage

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus

Also known as

Cd3e

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer

Preferred Names

CD3 molecule, epsilon polypeptide

Names

CD3 molecule, epsilon polypeptide

CD3 antigen, epsilon polypeptide

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001108140.1 → NP_001101610.1  CD3 molecule, epsilon polypeptide

   Source sequence(s)

   CH473975

   Conserved Domains (2) summary

   smart00077
   Location:166 – 186
   Blast Score: 83

   ITAM; Immunoreceptor tyrosine-based activation motif

   cl00093
   Location:29 – 83
   Blast Score: 118

   IG; Immunoglobulin domain family; members are components of immunoglobulins, neuroglia, cell surface glycoproteins, such as, T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as, butyrophilin and chondroitin sulfate proteoglycan core...

RefSeqs of Annotated Genomes: Build 4.1

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference assembly (based on RGSC v3.4)

Genomic

1. NC_005107.2

   Range

   47947814..47958392, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NW_047799.2

   Range

   17567038..17577616, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_236196.3 → XP_236196.2  

Alternate assembly (based on Celera assembly)

Genomic

1. AC_000076.1

   Range

   44889165..44901098, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NW_001084873.1

   Range

   5576748..5588681, complement

   Download

   GenBank FASTA Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_001063976.1 → XP_001063976.1