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    fam81b family with sequence similarity 81 member B [ Danio rerio (zebrafish) ]

    Gene ID: 101886959, updated on 27-Mar-2024

    Summary

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    Official Symbol
    fam81bprovided by ZNC
    Official Full Name
    family with sequence similarity 81 member Bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-130530-586
    See related
    AllianceGenome:ZFIN:ZDB-GENE-130530-586
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Orthologous to human FAM81B (family with sequence similarity 81 member B). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human mouse all
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    Genomic context

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    See fam81b in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (50785568..50828324)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (50138999..50168779)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene multiple C2 domains, transmembrane 1a Neighboring gene zgc:194908 Neighboring gene uncharacterized LOC110439828 Neighboring gene SKI3 subunit of superkiller complex Neighboring gene transfer RNA serine (anticodon UGA) Neighboring gene nucleolar protein 6 (RNA-associated)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein FAM81B
    Names
    zmp:0000000583

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      50785568..50828324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009301797.3 → XP_009300072.1  protein FAM81B

      UniProtKB/TrEMBL
      A0A8M3ASS7
      Conserved Domains (1) summary
      cl25732
      Location:10 → 300
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_021476624.1 → XP_021332299.1  protein FAM81B

      UniProtKB/TrEMBL
      A0A8M3ASS7
      Conserved Domains (1) summary
      cl25732
      Location:10 → 300
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein
    Heading Accession and Version

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