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    FAM186A family with sequence similarity 186 member A [ Canis lupus familiaris (dog) ]

    Gene ID: 100684991, updated on 8-Mar-2024

    Summary

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    Official Symbol
    FAM186Aprovided by VGNC
    Official Full Name
    family with sequence similarity 186 member Aprovided by VGNC
    Primary source
    VGNC:VGNC:54301
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 27
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (4377343..4470157)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (41836726..41929426, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (42231195..42324097, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (4340792..4434758)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (4330454..4423432)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 1 Neighboring gene disco interacting protein 2 homolog B Neighboring gene 60S acidic ribosomal protein P1-like Neighboring gene La ribonucleoprotein 4 Neighboring gene uncharacterized LOC111092730 Neighboring gene LIM domain and actin binding 1 Neighboring gene ceramide synthase 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein FAM186A; LOW QUALITY PROTEIN: protein FAM186A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      4377343..4470157
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038437944.1 → XP_038293872.1  LOW QUALITY PROTEIN: protein FAM186A isoform X1

      Conserved Domains (3) summary
      PTZ00121
      Location:422 → 989
      PTZ00121; MAEBL; Provisional
      PHA03247
      Location:1809 → 2112
      PHA03247; large tegument protein UL36; Provisional
      pfam03157
      Location:1097 → 1663
      Glutenin_hmw; High molecular weight glutenin subunit

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      4340792..4434758
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038514239.1 → XP_038370167.1  LOW QUALITY PROTEIN: protein FAM186A isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      4330454..4423432
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640667.1 → XP_038496595.1  protein FAM186A isoform X7

    2. XM_038640665.1 → XP_038496593.1  protein FAM186A isoform X5

    3. XM_038640663.1 → XP_038496591.1  protein FAM186A isoform X3

    4. XM_038640664.1 → XP_038496592.1  protein FAM186A isoform X4

    5. XM_038640666.1 → XP_038496594.1  protein FAM186A isoform X6

    RNA

    1. XR_005413536.1 RNA Sequence

    2. XR_005413537.1 RNA Sequence

    3. XR_005413535.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      42231195..42324097 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577638.1 → XP_038433566.1  protein FAM186A isoform X8

    2. XM_038577641.1 → XP_038433569.1  protein FAM186A isoform X11

    3. XM_038577639.1 → XP_038433567.1  protein FAM186A isoform X9

    4. XM_038577642.1 → XP_038433570.1  protein FAM186A isoform X12

    5. XM_038577640.1 → XP_038433568.1  protein FAM186A isoform X10

    RNA

    1. XR_005380140.1 RNA Sequence

    2. XR_005380141.1 RNA Sequence

    3. XR_005380142.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      41836726..41929426 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005636842.4 → XP_005636899.3  LOW QUALITY PROTEIN: protein FAM186A isoform X13

      Conserved Domains (4) summary
      PTZ00121
      Location:410 → 977
      PTZ00121; MAEBL; Provisional
      PHA03247
      Location:1773 → 2076
      PHA03247; large tegument protein UL36; Provisional
      pfam03157
      Location:851 → 1452
      Glutenin_hmw; High molecular weight glutenin subunit
      cl41773
      Location:1264 → 1649
      SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
    Nucleotide Protein
    Heading Accession and Version

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