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    TMEM88B transmembrane protein 88B [ Canis lupus familiaris (dog) ]

    Gene ID: 100684204, updated on 8-Mar-2024

    Summary

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    Official Symbol
    TMEM88Bprovided by VGNC
    Official Full Name
    transmembrane protein 88Bprovided by VGNC
    Primary source
    VGNC:VGNC:47612
    See related
    Ensembl:ENSCAFG00845025202
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (56772105..56774043)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (56645679..56647617)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (57044927..57046868)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (56762323..56764261)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (56654578..56656518)

    Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L20 Neighboring gene ankyrin repeat domain 65 Neighboring gene von Willebrand factor A domain containing 1 Neighboring gene uncharacterized LOC119871890

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables PDZ domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein 88B; LOW QUALITY PROTEIN: transmembrane protein 88B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051809.1 Reference ROS_Cfam_1.0

      Range
      56772105..56774043
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038666357.1 → XP_038522285.1  transmembrane protein 88B

      UniProtKB/TrEMBL
      A0A8C0KBM7, A0A8I3PKE0, A0A8P0PH68
      Related
      ENSCAFP00845034841.1, ENSCAFT00845044464.1

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049265.1 Alternate UMICH_Zoey_3.1

      Range
      56762323..56764261
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038476481.1 → XP_038332409.1  transmembrane protein 88B

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

      Range
      56654578..56656518
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038601784.1 → XP_038457712.1  transmembrane protein 88B

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

      Range
      57044927..57046868
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038537619.1 → XP_038393547.1  LOW QUALITY PROTEIN: transmembrane protein 88B

      UniProtKB/TrEMBL
      A0A8C0KBM7

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      56645679..56647617
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003434671.5 → XP_003434719.1  transmembrane protein 88B

      UniProtKB/TrEMBL
      A0A8C0KBM7, A0A8I3PKE0, A0A8P0PH68
    Nucleotide Protein
    Heading Accession and Version

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