U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RPS15A ribosomal protein S15a [ Pan troglodytes (chimpanzee) ]

    Gene ID: 100614776, updated on 13-Apr-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    RPS15A
    Gene description
    ribosomal protein S15a
    See related
    Ensembl:ENSPTRG00000007823
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RPS15A in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (21416231..21423489, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (21416236..21423483, complement)

    Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene BOS complex subunit NOMO1 Neighboring gene uncharacterized LOC129137282 Neighboring gene uncharacterized LOC112207762 Neighboring gene ADP ribosylation factor like GTPase 6 interacting protein 1 Neighboring gene SMG1 nonsense mediated mRNA decay associated PI3K related kinase Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    small ribosomal subunit protein uS8
    NP_001238921.1
    XP_009428661.1
    XP_009428662.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001251992.2 → NP_001238921.1  small ribosomal subunit protein uS8

      See identical proteins and their annotated locations for NP_001238921.1

      Status: VALIDATED

      Source sequence(s)
      DC525829, JAQQLN020000018
      UniProtKB/TrEMBL
      H2QAN1, H2RH75
      Related
      ENSPTRP00000013350.2, ENSPTRT00000014415.3
      Conserved Domains (1) summary
      PTZ00158
      Location:1 → 130
      PTZ00158; 40S ribosomal protein S15A; Provisional

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      21416231..21423489 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009430386.4 → XP_009428661.1  small ribosomal subunit protein uS8 isoform X1

      See identical proteins and their annotated locations for XP_009428661.1

      UniProtKB/TrEMBL
      H2QAN1, H2RH75
      Conserved Domains (1) summary
      PTZ00158
      Location:1 → 130
      PTZ00158; 40S ribosomal protein S15A; Provisional

    2. XM_009430387.5 → XP_009428662.1  small ribosomal subunit protein uS8 isoform X1

      See identical proteins and their annotated locations for XP_009428662.1

      UniProtKB/TrEMBL
      H2QAN1, H2RH75
      Conserved Domains (1) summary
      PTZ00158
      Location:1 → 130
      PTZ00158; 40S ribosomal protein S15A; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Miscellaneous