U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    hoxc4 homeobox C4 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100486039, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    hoxc4provided by Xenbase
    Official Full Name
    homeobox C4provided by Xenbase
    Primary source
    Xenbase:XB-GENE-967141
    See related
    Ensembl:ENSXETG00000038997
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (146016225..146018980, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (142817347..142859621, complement)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase N1-like Neighboring gene homeobox C3 Neighboring gene microRNA mir-10c Neighboring gene homeobox C5

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    homeobox protein Hox-C4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      146016225..146018980 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002936638.5 → XP_002936684.1  homeobox protein Hox-C4

      UniProtKB/TrEMBL
      A0A6I8RGQ5, A0A803JCC3
      Related
      ENSXETP00000105525.1, ENSXETT00000111541.1
      Conserved Domains (1) summary
      pfam00046
      Location:196 → 250
      Homeobox; Homeobox domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.