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    spata2 spermatogenesis associated 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100380171, updated on 8-Mar-2024

    Summary

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    Official Symbol
    spata2provided by Xenbase
    Official Full Name
    spermatogenesis associated 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-1000068
    See related
    Ensembl:ENSXETG00000024008
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    pd1; tamo
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (36155689..36169051, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (27921819..27935691, complement)

    Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene CCAAT enhancer binding protein beta Neighboring gene opsin 7, beta Neighboring gene ring finger protein 114 Neighboring gene snail family zinc finger 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    spermatogenesis-associated protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      36155689..36169051 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002933154.5 → XP_002933200.1  spermatogenesis-associated protein 2

      UniProtKB/TrEMBL
      F7EKQ2
      Related
      ENSXETP00000109846.1, ENSXETT00000113096.1
    Nucleotide Protein Strain
    Heading Accession and Version

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