These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001191425.2 → NP_001178354.2  usherin

   Status: PROVISIONAL

   Source sequence(s)

   NKLS02000016

   UniProtKB/TrEMBL

   E1BP05

   Related

   ENSBTAP00000053495.3, ENSBTAT00000061112.3

   Conserved Domains (8) summary

   smart00060
   Location:1368 → 1451

   FN3; Fibronectin type 3 domain

   smart00560
   Location:146 → 283

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:900 → 948

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1145 → 1238

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1519 → 1678

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   pfam00053
   Location:1002 → 1050

   Laminin_EGF; Laminin EGF domain

   pfam00041
   Location:4357 → 4430

   fn3; Fibronectin type III domain

   cl02806
   Location:316 → 516

   Laminin_N; Laminin N-terminal (Domain VI)

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference ARS-UCD2.0 Primary Assembly

Genomic

1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

   Range

   18892333..19815906 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)