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    Krtap4-25 keratin associated protein 4-25 [ Mus musculus (house mouse) ]

    Gene ID: 100040248, updated on 20-Feb-2024

    Summary

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    Official Symbol
    Krtap4-25provided by MGI
    Official Full Name
    keratin associated protein 4-25provided by MGI
    Primary source
    MGI:MGI:3650330
    See related
    Ensembl:ENSMUSG00000069718 AllianceGenome:MGI:3650330
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm11563; 2310045F10Rik
    Summary
    Orthologous to several human genes including KRTAP4-11 (keratin associated protein 4-11); KRTAP4-12 (keratin associated protein 4-12); and KRTAP4-6 (keratin associated protein 4-6). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See Krtap4-25 in Genome Data Viewer
    Location:
    11 D; 11 63.0 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (99548768..99549785, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (99657942..99658959, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene keratin associated protein 4-7 Neighboring gene keratin associated protein 4-24 Neighboring gene STARR-seq mESC enhancer starr_30707 Neighboring gene keratin associated protein 4-6 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851
    2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, et al. Nature, 2002 Dec 5. PMID 12466851

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    keratin associated protein 4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126320.2 → NP_001119792.1  keratin associated protein 4-like

      Status: VALIDATED

      Source sequence(s)
      AL590997
      Consensus CDS
      CCDS48913.1
      UniProtKB/TrEMBL
      B1AQ90
      Related
      ENSMUSP00000090369.4, ENSMUST00000092695.5
      Conserved Domains (2) summary
      pfam01500
      Location:38 → 167
      Keratin_B2; Keratin, high sulfur B2 protein
      pfam13885
      Location:54 → 98
      Keratin_B2_2; Keratin, high sulfur B2 protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      99548768..99549785 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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