dach1.S dachshund family transcription factor 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: dach1.S
Official Full Name: dachshund family transcription factor 1 S homeolog
Primary source: Xenbase:XB-GENE-980852
Locus tag: XELAEV_18015727mg
See related: EnsemblRapid:ENSXLAG00005019017
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: dach; dach1; dachA; dachB
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 2S

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2S	NC_054374.1 (118521901..118753480)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2S	NC_030727.1 (109458297..109690272)

Chromosome 2S - NC_054374.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Dach1 regulates neural crest migration during embryonic development.
Title: Dach1 regulates neural crest migration during embryonic development.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of transcription regulator complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: dachshund family transcription factor 1 S homeolog

Names: dachshund 1; dachshund homolog 1; putative dachschund B; putative dachshund A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096718.1 → NP_001090187.1 dachshund family transcription factor 1 S homeolog

See identical proteins and their annotated locations for NP_001090187.1

Status: PROVISIONAL

Source sequence(s)

DQ786654

UniProtKB/TrEMBL

A0A974DIZ8, Q0PNF8

Related

ENSXLAP00005056158.1, ENSXLAT00005057387.1

Conserved Domains (2) summary

pfam02437
Location:172 → 272

Ski_Sno; SKI/SNO/DAC family

cl20817
Location:617 → 670

GBP_C; Guanylate-binding protein, C-terminal domain