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    SDC3 syndecan 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704374, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SDC3provided by VGNC
    Official Full Name
    syndecan 3provided by VGNC
    Primary source
    VGNC:VGNC:76999
    See related
    Ensembl:ENSMMUG00000013519
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (193754253..193819930)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (29928871..29967832, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene pumilio RNA binding family member 1 Neighboring gene small nucleolar RNA SNORD103/SNORD85 Neighboring gene uncharacterized LOC114673215 Neighboring gene uncharacterized LOC106997430 Neighboring gene lysosomal protein transmembrane 5 Neighboring gene matrilin 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    syndecan-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      193754253..193819930
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015133580.2 → XP_014989066.2  syndecan-3 isoform X2

      UniProtKB/TrEMBL
      F6Z7A3, H9F5W8
      Related
      ENSMMUP00000017780.4, ENSMMUT00000018984.4
      Conserved Domains (2) summary
      PHA03247
      Location:124 → 358
      PHA03247; large tegument protein UL36; Provisional
      pfam01034
      Location:399 → 440
      Syndecan; Syndecan domain

    2. XM_028836979.1 → XP_028692812.1  syndecan-3 isoform X3

      Conserved Domains (1) summary
      PHA03247
      Location:145 → 379
      PHA03247; large tegument protein UL36; Provisional

    3. XM_028836981.1 → XP_028692814.1  syndecan-3 isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZXW1, G7MI16
      Related
      ENSMMUP00000069482.1, ENSMMUT00000092753.1
      Conserved Domains (1) summary
      PHA03247
      Location:145 → 379
      PHA03247; large tegument protein UL36; Provisional

    4. XM_028836990.1 → XP_028692823.1  syndecan-3 isoform X5

      UniProtKB/TrEMBL
      G7MI16
      Conserved Domains (1) summary
      PHA03247
      Location:145 → 379
      PHA03247; large tegument protein UL36; Provisional

    5. XM_028836972.1 → XP_028692805.1  syndecan-3 isoform X1

      UniProtKB/TrEMBL
      F6Z7J1, G7MI16
      Related
      ENSMMUP00000017778.4, ENSMMUT00000018982.4
      Conserved Domains (2) summary
      PHA03247
      Location:145 → 379
      PHA03247; large tegument protein UL36; Provisional
      pfam01034
      Location:420 → 461
      Syndecan; Syndecan domain

    6. XM_028836997.1 → XP_028692830.1  syndecan-3 isoform X6

      UniProtKB/TrEMBL
      A0A5F7ZUS3, G7MI16
      Related
      ENSMMUP00000068913.1, ENSMMUT00000083449.1
      Conserved Domains (2) summary
      PHA03247
      Location:82 → 316
      PHA03247; large tegument protein UL36; Provisional
      pfam01034
      Location:357 → 398
      Syndecan; Syndecan domain
    Nucleotide Protein
    Heading Accession and Version

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