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    SALL1 spalt like transcription factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699909, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SALL1provided by VGNC
    Official Full Name
    spalt like transcription factor 1provided by VGNC
    Primary source
    VGNC:VGNC:76966
    See related
    Ensembl:ENSMMUG00000017200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 20
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (38235433..38250961, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (35069938..35085410, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114674299 Neighboring gene uncharacterized LOC106995013 Neighboring gene uncharacterized LOC106995014 Neighboring gene uncharacterized LOC114674320 Neighboring gene uracil-DNA glycosylase pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sal-like protein 1
    Names
    sal-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      38235433..38250961 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126115.2 → XP_014981601.2  sal-like protein 1

      UniProtKB/TrEMBL
      F7HGM0, H9FY83
      Related
      ENSMMUP00000022626.4, ENSMMUT00000024181.4
      Conserved Domains (5) summary
      smart00355
      Location:449 → 471
      ZnF_C2H2; zinc finger
      sd00017
      Location:708 → 728
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1003 → 1023
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:1134 → 1156
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:720 → 745
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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