U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    PTRG_09611 ubiquitin carboxyl-terminal hydrolase 19 [ Pyrenophora tritici-repentis Pt-1C-BFP ]

    Gene ID: 6347901, updated on 28-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    PTRG_09611
    Gene description
    ubiquitin carboxyl-terminal hydrolase 19
    Locus tag
    PTRG_09611
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pyrenophora tritici-repentis Pt-1C-BFP (strain: Pt-1C-BFP)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Pyrenophora
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: Unknown
    Exon count:
    7

    NW_001939254.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene GDSL Lipase/Acylhydrolase family protein Neighboring gene chloride channel protein 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_001939254.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ubiquitin carboxyl-terminal hydrolase 19

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001939254.1 Reference assembly

      Range
      1117806..1124893 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001939908.1 → XP_001939943.1  ubiquitin carboxyl-terminal hydrolase 19 [Pyrenophora tritici-repentis Pt-1C-BFP]

      See identical proteins and their annotated locations for XP_001939943.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5M9L3H4, B2WI02
      Conserved Domains (3) summary
      COG5560
      Location:999 → 1673
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cl02553
      Location:1548 → 1675
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
      pfam06337
      Location:677 → 783
      DUSP; DUSP domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases