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    GSDMA gasdermin A [ Bos taurus (cattle) ]

    Gene ID: 618583, updated on 5-Mar-2024

    Summary

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    Official Symbol
    GSDMAprovided by VGNC
    Official Full Name
    gasdermin Aprovided by VGNC
    Primary source
    VGNC:VGNC:49998
    See related
    BGD:BT25984; Ensembl:ENSBTAG00000010070
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    GSDM1
    Orthologs
    human all
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    Genomic context

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    Location:
    chromosome: 19
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (40285452..40304382)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene ORMDL sphingolipid biosynthesis regulator 3 Neighboring gene leucine rich repeat containing 3C Neighboring gene proteasome 26S subunit, non-ATPase 3 Neighboring gene colony stimulating factor 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC155094

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-4-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pyroptosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gasdermin-A
    Names
    gasdermin 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078090.1 → NP_001071558.1  gasdermin-A

      See identical proteins and their annotated locations for NP_001071558.1

      Status: PROVISIONAL

      Source sequence(s)
      BC126753
      UniProtKB/TrEMBL
      A0JNL0, F1MUE4
      Related
      ENSBTAP00000013285.6, ENSBTAT00000013285.6
      Conserved Domains (1) summary
      pfam04598
      Location:3 → 419
      Gasdermin; Gasdermin family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      40285452..40304382
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024980498.2 → XP_024836266.1  gasdermin-A isoform X1

      UniProtKB/TrEMBL
      F1MUE4
      Conserved Domains (1) summary
      pfam04598
      Location:54 → 470
      Gasdermin; Gasdermin family
    Nucleotide Protein Strain
    Heading Accession and Version

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