U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ADAT2 adenosine deaminase tRNA specific 2 [ Bos taurus (cattle) ]

    Gene ID: 615418, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ADAT2provided by VGNC
    Official Full Name
    adenosine deaminase tRNA specific 2provided by VGNC
    Primary source
    VGNC:VGNC:25638
    See related
    BGD:BT10419; Ensembl:ENSBTAG00000026519
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    DEADC1
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ADAT2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (80884277..80913103, complement)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene androgen induced 1 Neighboring gene uncharacterized LOC132346128 Neighboring gene uncharacterized LOC104969611 Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene alpha-L-fucosidase 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tRNA-specific adenosine-34 deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA wobble adenosine to inosine editing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tRNA-specific adenosine deaminase 2
    Names
    adenosine deaminase, tRNA-specific 2, TAD2 homolog
    deaminase domain containing 1
    deaminase domain-containing protein 1
    tRNA-specific adenosine-34 deaminase subunit ADAT2
    NP_001029952.1
    XP_005211073.1
    XP_059745825.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034780.1 → NP_001029952.1  tRNA-specific adenosine deaminase 2

      See identical proteins and their annotated locations for NP_001029952.1

      Status: PROVISIONAL

      Source sequence(s)
      BT020923
      UniProtKB/Swiss-Prot
      Q5E9J7
      Related
      ENSBTAP00000037541.2, ENSBTAT00000037717.4
      Conserved Domains (1) summary
      COG0590
      Location:16 → 173
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      80884277..80913103 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005211016.5 → XP_005211073.1  tRNA-specific adenosine deaminase 2 isoform X1

      Conserved Domains (1) summary
      COG0590
      Location:33 → 138
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    2. XM_059889842.1 → XP_059745825.1  tRNA-specific adenosine deaminase 2 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5E9J7.1 GenPept UniProtKB/Swiss-Prot:Q5E9J7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous