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    TXNDC5 thioredoxin domain containing 5 [ Bos taurus (cattle) ]

    Gene ID: 615027, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TXNDC5provided by VGNC
    Official Full Name
    thioredoxin domain containing 5provided by VGNC
    Primary source
    VGNC:VGNC:107007
    See related
    BGD:BT30268; Ensembl:ENSBTAG00000019237
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TXNDC5 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (47476520..47502237)

    Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 epsilon 1 Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 5 Neighboring gene bone morphogenetic protein 6 Neighboring gene mitochondrial ribosomal protein S14 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein disulfide isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    thioredoxin domain-containing protein 5
    NP_001193661.1
    XP_059736413.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206732.1 → NP_001193661.1  thioredoxin domain-containing protein 5 precursor

      Status: VALIDATED

      Source sequence(s)
      CA035292, DV929088, EE369630, EH182135, EH205033
      UniProtKB/TrEMBL
      A0A3Q1LUG9
      Related
      ENSBTAP00000064179.1, ENSBTAT00000076880.1
      Conserved Domains (2) summary
      cd03005
      Location:195 → 295
      PDI_a_ERp46; PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains. Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in ...
      TIGR01130
      Location:71 → 437
      ER_PDI_fam; protein disulfide isomerase, eukaryotic

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      47476520..47502237
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059880430.1 → XP_059736413.1  thioredoxin domain-containing protein 5 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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