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    RAB40B RAB40B, member RAS oncogene family [ Canis lupus familiaris (dog) ]

    Gene ID: 608295, updated on 5-Mar-2024

    Summary

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    Official Symbol
    RAB40Bprovided by VGNC
    Official Full Name
    RAB40B, member RAS oncogene familyprovided by VGNC
    Primary source
    VGNC:VGNC:111680
    See related
    Ensembl:ENSCAFG00845026469
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    RAB40AL
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (351762..371277)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (359952..379474)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (582386..601900)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (345847..365366)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (507101..526608)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene fructosamine 3 kinase Neighboring gene fructosamine 3 kinase related protein Neighboring gene uncharacterized LOC102154540 Neighboring gene WD repeat domain 45B Neighboring gene forkhead box K2 Neighboring gene transfer RNA methionine (anticodon CAU)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-40A-like; ras-related protein Rab-40B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      351762..371277
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038675330.1 → XP_038531258.1  ras-related protein Rab-40B

      UniProtKB/TrEMBL
      A0A8C0KLI5, A0A8C0QLC8, A0A8I3SA64, A0A8P0PNM0
      Related
      ENSCAFP00845036673.1, ENSCAFT00845046736.1
      Conserved Domains (2) summary
      cd04121
      Location:18 → 196
      Rab40; Rab GTPase family 40 (Rab40) contains Rab40a, Rab40b and Rab40c
      cd03742
      Location:196 → 238
      SOCS_Rab40; SOCS (suppressors of cytokine signaling) box of Rab40-like proteins. Rab40 is part of the Rab family of small GTP-binding proteins that form the largest family within the Ras superfamily. Rab proteins regulate vesicular trafficking pathways, behaving as ...

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      345847..365366
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038484577.1 → XP_038340505.1  ras-related protein Rab-40B

      Conserved Domains (2) summary
      cd04121
      Location:18 → 196
      Rab40; Rab GTPase family 40 (Rab40) contains Rab40a, Rab40b and Rab40c
      cd03742
      Location:196 → 238
      SOCS_Rab40; SOCS (suppressors of cytokine signaling) box of Rab40-like proteins. Rab40 is part of the Rab family of small GTP-binding proteins that form the largest family within the Ras superfamily. Rab proteins regulate vesicular trafficking pathways, behaving as ...

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      507101..526608
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038610228.1 → XP_038466156.1  ras-related protein Rab-40B

      Conserved Domains (2) summary
      cd04121
      Location:18 → 196
      Rab40; Rab GTPase family 40 (Rab40) contains Rab40a, Rab40b and Rab40c
      cd03742
      Location:196 → 238
      SOCS_Rab40; SOCS (suppressors of cytokine signaling) box of Rab40-like proteins. Rab40 is part of the Rab family of small GTP-binding proteins that form the largest family within the Ras superfamily. Rab proteins regulate vesicular trafficking pathways, behaving as ...

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      582386..601900
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038546213.1 → XP_038402141.1  ras-related protein Rab-40B

      UniProtKB/TrEMBL
      A0A8C0KLI5, A0A8C0QLC8, A0A8I3SA64, A0A8P0PNM0
      Conserved Domains (2) summary
      cd04121
      Location:18 → 196
      Rab40; Rab GTPase family 40 (Rab40) contains Rab40a, Rab40b and Rab40c
      cd03742
      Location:196 → 238
      SOCS_Rab40; SOCS (suppressors of cytokine signaling) box of Rab40-like proteins. Rab40 is part of the Rab family of small GTP-binding proteins that form the largest family within the Ras superfamily. Rab proteins regulate vesicular trafficking pathways, behaving as ...

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      359952..379474
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038622677.1 → XP_038478605.1  ras-related protein Rab-40B

      UniProtKB/TrEMBL
      A0A8C0KLI5, A0A8C0QLC8, A0A8I3SA64, A0A8P0PNM0
      Conserved Domains (2) summary
      cd04121
      Location:18 → 196
      Rab40; Rab GTPase family 40 (Rab40) contains Rab40a, Rab40b and Rab40c
      cd03742
      Location:196 → 238
      SOCS_Rab40; SOCS (suppressors of cytokine signaling) box of Rab40-like proteins. Rab40 is part of the Rab family of small GTP-binding proteins that form the largest family within the Ras superfamily. Rab proteins regulate vesicular trafficking pathways, behaving as ...
    Nucleotide Protein
    Heading Accession and Version

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