coro7 coronin 7 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: coro7provided by ZNC
Official Full Name: coronin 7provided by ZNC
Primary source: ZFIN:ZDB-GENE-050706-137
See related: Ensembl:ENSDARG00000089616 AllianceGenome:ZFIN:ZDB-GENE-050706-137
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:112352
Summary: Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization. Predicted to be located in Golgi membrane and cytosol. Orthologous to human CORO7-PAM16 (CORO7-PAM16 readthrough). [provided by Alliance of Genome Resources, Apr 2022]
Annotation information: Annotation category: partial on reference assembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 20

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	3	NC_007114.7 (12360706..12381272, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	3	NC_007114.6 (12207763..12228329, complement)

Chromosome 3 - NC_007114.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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General protein information

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Preferred Names: coronin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001030236.1 → NP_001025407.1 coronin-7

See identical proteins and their annotated locations for NP_001025407.1

Status: PROVISIONAL

Source sequence(s)

BC098622

UniProtKB/TrEMBL

Q4KMD0

Related

ENSDARP00000138812.2, ENSDART00000171068.2

Conserved Domains (4) summary

pfam08953
Location:467 → 524

DUF1899; Domain of unknown function (DUF1899)

pfam16300
Location:339 → 382

WD40_4; Type of WD40 repeat

sd00039
Location:501 → 537

7WD40; WD40 repeat [structural motif]

cl02567
Location:547 → 723

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...