mmd2a monocyte to macrophage differentiation-associated 2a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: mmd2aprovided by ZNC
Official Full Name: monocyte to macrophage differentiation-associated 2aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-081104-52
See related: Ensembl:ENSDARG00000087446 AllianceGenome:ZFIN:ZDB-GENE-081104-52
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: mmd2; paqr10; si:dkey-21n8.8
Summary: Acts upstream of or within heart morphogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including nervous system; notochord; pectoral fin; vasculature; and ventral mesoderm. Orthologous to human MMD2 (monocyte to macrophage differentiation associated 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	3	NC_007114.7 (40841984..40870521)
105	previous assembly	GRCz10 (GCF_000002035.5)	3	NC_007114.6 (40700126..40728663)

Chromosome 3 - NC_007114.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables pore-forming activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within heart morphogenesis	IGI Inferred from Genetic Interaction more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: monocyte to macrophage differentiation factor 2a

Names: monocyte to macrophage differentiation-associated 2; progestin and adipoQ receptor 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.