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    TUBB2 Tubulin beta-2 chain [ Zea mays ]

    Gene ID: 542380, updated on 9-Mar-2024

    Summary

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    Gene symbol
    TUBB2
    Gene description
    Tubulin beta-2 chain
    Locus tag
    ZEAMMB73_Zm00001d010275
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    TUB2; TIDP2849; GRMZM2G334899
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    Genomic context

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    Location:
    chromosome: 8
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 8 NC_050103.1 (106910274..106913385, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 8 NC_024466.2 (107053903..107057014, complement)

    Chromosome 8 - NC_050103.1Genomic Context describing neighboring genes Neighboring gene putative mediator of RNA polymerase II transcription subunit 26b Neighboring gene uncharacterized LOC100502421 Neighboring gene ribosome maturation factor RimM Neighboring gene uncharacterized LOC100381957

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The beta-tubulin gene family in Zea mays: two differentially expressed beta-tubulin genes. Hussey PJ, et al. Plant Mol Biol, 1990 Dec. PMID 2103487
    2. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article
    3. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    4. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    5. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tubulin beta-2 chain
    Names
    beta 2 tubulin (AA 1-444)
    beta tubulin2
    beta-2-tubulin
    NP_001105426.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001111956.1 → NP_001105426.1  tubulin beta-2 chain

      See identical proteins and their annotated locations for NP_001105426.1

      Status: PROVISIONAL

      Source sequence(s)
      X52879
      UniProtKB/Swiss-Prot
      P18026, Q41785
      Conserved Domains (2) summary
      PLN00220
      Location:1 → 429
      PLN00220; tubulin beta chain; Provisional
      cd02187
      Location:2 → 426
      beta_tubulin; The beta-tubulin family

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050103.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      106910274..106913385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P18026.1 GenPept UniProtKB/Swiss-Prot:P18026

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases