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    SLC8A3 solute carrier family 8 member A3 [ Bos taurus (cattle) ]

    Gene ID: 540307, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SLC8A3provided by VGNC
    Official Full Name
    solute carrier family 8 member A3provided by VGNC
    Primary source
    VGNC:VGNC:34937
    See related
    BGD:BT29059; Ensembl:ENSBTAG00000027080
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SLC8A3 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (81762305..81931753, complement)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104973229 Neighboring gene solute carrier family 10 member 1 Neighboring gene SPARC related modular calcium binding 1 Neighboring gene uncharacterized LOC112448519 Neighboring gene uncharacterized LOC132346410 Neighboring gene synaptojanin 2 binding protein Neighboring gene large ribosomal subunit protein eL43-like Neighboring gene cytochrome c oxidase assembly factor COX16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium:sodium antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell communication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium/calcium exchanger 3
    Names
    solute carrier family 8 (sodium-calcium exchanger), member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191199.3 → NP_001178128.1  sodium/calcium exchanger 3 precursor

      See identical proteins and their annotated locations for NP_001178128.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000010
      UniProtKB/TrEMBL
      A0A3Q1LST7
      Related
      ENSBTAP00000040809.4, ENSBTAT00000022798.6
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 927
      caca; sodium/calcium exchanger 1

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      81762305..81931753 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059890582.1 → XP_059746565.1  sodium/calcium exchanger 3 isoform X1

      Related
      ENSBTAP00000059584.2, ENSBTAT00000077819.2

    2. XM_010809505.4 → XP_010807807.1  sodium/calcium exchanger 3 isoform X4

      See identical proteins and their annotated locations for XP_010807807.1

      UniProtKB/TrEMBL
      E1BM32
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 921
      caca; sodium/calcium exchanger 1

    3. XM_015473255.3 → XP_015328741.1  sodium/calcium exchanger 3 isoform X6

      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 926
      caca; sodium/calcium exchanger 1

    4. XM_010809503.4 → XP_010807805.1  sodium/calcium exchanger 3 isoform X2

      See identical proteins and their annotated locations for XP_010807805.1

      UniProtKB/TrEMBL
      A0A3Q1LST7
      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 927
      caca; sodium/calcium exchanger 1

    5. XM_015473254.3 → XP_015328740.1  sodium/calcium exchanger 3 isoform X3

      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 927
      caca; sodium/calcium exchanger 1

    6. XM_005212028.5 → XP_005212085.1  sodium/calcium exchanger 3 isoform X1

      See identical proteins and their annotated locations for XP_005212085.1

      Conserved Domains (1) summary
      TIGR00845
      Location:1 → 928
      caca; sodium/calcium exchanger 1

    7. XM_024997760.2 → XP_024853528.1  sodium/calcium exchanger 3 isoform X5

      Conserved Domains (1) summary
      cl02522
      Location:4 → 311
      Calx-beta; Calx-beta domain
    Nucleotide Protein Strain
    Heading Accession and Version

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