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    NEBL nebulette [ Bos taurus (cattle) ]

    Gene ID: 517987, updated on 5-Mar-2024

    Summary

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    Official Symbol
    NEBLprovided by VGNC
    Official Full Name
    nebuletteprovided by VGNC
    Primary source
    VGNC:VGNC:57012
    See related
    Ensembl:ENSBTAG00000013339
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 13
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (22094459..22474860, complement)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene plexin domain containing 2 Neighboring gene adipocyte differentiation-associated long noncoding RNA Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene BRCA1-associated RING domain protein 1-like Neighboring gene transfer RNA histidin (anticodon GUG) Neighboring gene 40S ribosomal protein S13 pseudogene Neighboring gene microRNA mir-2285d

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cardiac muscle thin filament assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Z disc IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nebulette

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191413.2 → NP_001178342.1  nebulette

      See identical proteins and their annotated locations for NP_001178342.1

      Status: VALIDATED

      Source sequence(s)
      NKLS02000013
      UniProtKB/TrEMBL
      F1MF57
      Related
      ENSBTAP00000053811.3, ENSBTAT00000061339.4
      Conserved Domains (3) summary
      smart00227
      Location:602 → 631
      NEBU; The Nebulin repeat is present also in Las1
      cd11935
      Location:956 → 1013
      SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
      pfam00880
      Location:322 → 346
      Nebulin; Nebulin repeat

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      22094459..22474860 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025000590.2 → XP_024856358.1  nebulette isoform X7

      Conserved Domains (4) summary
      smart00227
      Location:98 → 128
      NEBU; The Nebulin repeat is present also in Las1
      cd09447
      Location:5 → 57
      LIM_LASP; The LIM domain of LIM and SH3 Protein (LASP)
      cd11935
      Location:213 → 270
      SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
      pfam00880
      Location:67 → 94
      Nebulin; Nebulin repeat

    2. XM_059892605.1 → XP_059748588.1  nebulette isoform X6

    3. XM_059892603.1 → XP_059748586.1  nebulette isoform X2

    4. XM_025000589.2 → XP_024856357.1  nebulette isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MXR2
      Conserved Domains (4) summary
      smart00227
      Location:530 → 559
      NEBU; The Nebulin repeat is present also in Las1
      cd11935
      Location:884 → 941
      SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
      pfam00880
      Location:468 → 493
      Nebulin; Nebulin repeat
      cl26511
      Location:220 → 682
      Neuromodulin_N; Gap junction protein N-terminal region

    5. XM_005214191.5 → XP_005214248.1  nebulette isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LY04
      Conserved Domains (3) summary
      smart00227
      Location:568 → 597
      NEBU; The Nebulin repeat is present also in Las1
      cd11935
      Location:922 → 979
      SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
      pfam00880
      Location:288 → 312
      Nebulin; Nebulin repeat

    6. XM_005214192.5 → XP_005214249.1  nebulette isoform X5

      UniProtKB/TrEMBL
      A0A3Q1M3T9
      Conserved Domains (3) summary
      smart00227
      Location:602 → 631
      NEBU; The Nebulin repeat is present also in Las1
      cd11935
      Location:875 → 932
      SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
      pfam00880
      Location:322 → 346
      Nebulin; Nebulin repeat

    7. XM_059892604.1 → XP_059748587.1  nebulette isoform X3

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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