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    PPT2 palmitoyl-protein thioesterase 2 [ Bos taurus (cattle) ]

    Gene ID: 516797, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PPT2provided by VGNC
    Official Full Name
    palmitoyl-protein thioesterase 2provided by VGNC
    Primary source
    VGNC:VGNC:57311
    See related
    Ensembl:ENSBTAG00000004436
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 23
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (27225232..27233612, complement)

    Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 5 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 1 Neighboring gene EGF like domain multiple 8 Neighboring gene proline rich transmembrane protein 1 Neighboring gene uncharacterized LOC132343671 Neighboring gene FKBP prolyl isomerase like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC138968

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables palmitoyl hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables thiolester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysosomal thioesterase PPT2
    Names
    PPT-2
    NP_001030395.2
    XP_005223713.1
    XP_005223714.1
    XP_059736321.1
    XP_059736322.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035318.2 → NP_001030395.2  lysosomal thioesterase PPT2 precursor

      See identical proteins and their annotated locations for NP_001030395.2

      Status: PROVISIONAL

      Source sequence(s)
      BC116122
      UniProtKB/Swiss-Prot
      Q1JQA0, Q58CW8
      Related
      ENSBTAP00000005815.5, ENSBTAT00000005815.6
      Conserved Domains (1) summary
      PLN02633
      Location:41 → 276
      PLN02633; palmitoyl protein thioesterase family protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      27225232..27233612 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005223656.5 → XP_005223713.1  lysosomal thioesterase PPT2 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M446
      Conserved Domains (1) summary
      PLN02633
      Location:47 → 282
      PLN02633; palmitoyl protein thioesterase family protein

    2. XM_005223657.2 → XP_005223714.1  lysosomal thioesterase PPT2 isoform X2

      See identical proteins and their annotated locations for XP_005223714.1

      UniProtKB/Swiss-Prot
      Q1JQA0, Q58CW8
      Conserved Domains (1) summary
      PLN02633
      Location:41 → 276
      PLN02633; palmitoyl protein thioesterase family protein

    3. XM_059880338.1 → XP_059736321.1  lysosomal thioesterase PPT2 isoform X2

      UniProtKB/Swiss-Prot
      Q1JQA0, Q58CW8

    4. XM_059880339.1 → XP_059736322.1  lysosomal thioesterase PPT2 isoform X2

      UniProtKB/Swiss-Prot
      Q1JQA0, Q58CW8
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1JQA0.1 GenPept UniProtKB/Swiss-Prot:Q1JQA0

    Gene LinkOut

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