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    AHCTF1 AT-hook containing transcription factor 1 [ Bos taurus (cattle) ]

    Gene ID: 504716, updated on 3-Apr-2024

    Summary

    Official Symbol
    AHCTF1provided by VGNC
    Official Full Name
    AT-hook containing transcription factor 1provided by VGNC
    Primary source
    VGNC:VGNC:25749
    See related
    BGD:BT22284; Ensembl:ENSBTAG00000013949
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    Location:
    chromosome: 16
    Exon count:
    39
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (30410239..30506676)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112441825 Neighboring gene 26S proteasome regulatory subunit 10B-like Neighboring gene small nucleolar RNA SNORA5 Neighboring gene kinesin family member 28 Neighboring gene saccharopine dehydrogenase (putative) Neighboring gene uncharacterized LOC132342451

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Pathways from PubChem

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192036.2NP_001178965.2  protein ELYS

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000016
      UniProtKB/TrEMBL
      F1MNL8

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      30410239..30506676
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059875268.1XP_059731251.1  protein ELYS isoform X1

    2. XM_005216798.5XP_005216855.2  protein ELYS isoform X1

      UniProtKB/TrEMBL
      F1MNL8
      Related
      ENSBTAP00000073178.2, ENSBTAT00000077376.2
      Conserved Domains (3) summary
      pfam07964
      Location:16772084
      Red1; Rec10 / Red1
      pfam13934
      Location:724945
      ELYS; Nuclear pore complex assembly
      pfam16687
      Location:2488
      ELYS-bb; beta-propeller of ELYS nucleoporin
    3. XM_059875267.1XP_059731250.1  protein ELYS isoform X3

    4. XM_059875265.1XP_059731248.1  protein ELYS isoform X1

    5. XM_059875266.1XP_059731249.1  protein ELYS isoform X2

    RNA

    1. XR_009490747.1 RNA Sequence