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    pcmt1.L protein-L-isoaspartate (D-aspartate) O-methyltransferase L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 495685, updated on 11-Apr-2024

    Summary

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    Official Symbol
    pcmt1.L
    Official Full Name
    protein-L-isoaspartate (D-aspartate) O-methyltransferase L homeolog
    Primary source
    Xenbase:XB-GENE-959022
    Locus tag
    XELAEV_18027049mg
    See related
    EnsemblRapid:ENSXLAG00005020392
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    pcmt1
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    Genomic context

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    Location:
    chromosome: 5L
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (65688218..65739210)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (68923470..68974647, complement)

    Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121393689 Neighboring gene paraneoplastic antigen Ma1 homolog Neighboring gene low-density lipoprotein receptor-related protein 11 Neighboring gene dynein light chain Tctex-type 1 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein modification process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein-L-isoaspartate (D-aspartate) O-methyltransferase L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001095164.1 → NP_001088633.1  protein-L-isoaspartate (D-aspartate) O-methyltransferase L homeolog

      See identical proteins and their annotated locations for NP_001088633.1

      Status: PROVISIONAL

      Source sequence(s)
      BC086277
      UniProtKB/TrEMBL
      Q5U253
      Conserved Domains (2) summary
      pfam01135
      Location:8 → 216
      PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
      cl17173
      Location:13 → 218
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      65688218..65739210
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018262043.2 → XP_018117532.1  protein-L-isoaspartate (D-aspartate) O-methyltransferase L homeolog isoform X2

      UniProtKB/TrEMBL
      A0A8J0V9X5, A0A974HJA7
      Related
      ENSXLAP00005059728.1, ENSXLAT00005061177.1

    2. XM_041562268.1 → XP_041418202.1  protein-L-isoaspartate (D-aspartate) O-methyltransferase L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J1KLJ9, A0A974HJA7
      Related
      ENSXLAP00005059722.1, ENSXLAT00005061171.1
      Conserved Domains (1) summary
      TIGR00080
      Location:78 → 297
      pimt; protein-L-isoaspartate(D-aspartate) O-methyltransferase
    Nucleotide Protein Strain
    Heading Accession and Version

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