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    dnajb5.S DnaJ heat shock protein family (Hsp40) member B5 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 495121, updated on 11-Apr-2024

    Summary

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    Official Symbol
    dnajb5.S
    Official Full Name
    DnaJ heat shock protein family (Hsp40) member B5 S homeolog
    Primary source
    Xenbase:XB-GENE-995214
    Locus tag
    XELAEV_18011172mg
    See related
    EnsemblRapid:ENSXLAG00005000135
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    dnajb5; dnajb5.L
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    Genomic context

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    Location:
    chromosome: 1S
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (199739483..199751074)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (179798617..179810296)

    Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108705545 Neighboring gene von Willebrand factor A domain containing 5A S homeolog Neighboring gene valosin containing protein S homeolog Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables protein-folding chaperone binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within chaperone cofactor-dependent protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DnaJ heat shock protein family (Hsp40) member B5 S homeolog; dnaJ heat shock protein family (Hsp40) member B5 S homeolog
    Names
    DnaJ (Hsp40) homolog, subfamily B, member 5
    DnaJ heat shock protein family (Hsp40) member B5 L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001094818.1 → NP_001088287.1  DnaJ heat shock protein family (Hsp40) member B5 S homeolog

      See identical proteins and their annotated locations for NP_001088287.1

      Status: PROVISIONAL

      Source sequence(s)
      BC084307
      UniProtKB/TrEMBL
      A0A974I2N8, Q5XGX0
      Related
      ENSXLAP00005000295.1, ENSXLAT00005000322.1
      Conserved Domains (1) summary
      COG0484
      Location:1 → 343
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      199739483..199751074
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018238426.2 → XP_018093915.1  dnaJ heat shock protein family (Hsp40) member B5 S homeolog isoform X2

      UniProtKB/TrEMBL
      A0A974I2N8, Q5XGX0
      Conserved Domains (1) summary
      COG0484
      Location:1 → 343
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

    2. XM_018238419.2 → XP_018093908.1  dnaJ heat shock protein family (Hsp40) member B5 S homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J0U0U3, A0A974I2N8
      Related
      ENSXLAP00005000292.1, ENSXLAT00005000319.1
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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