U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    dnal1.L dynein, axonemal, light chain 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 494635, updated on 11-Apr-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    dnal1.L
    Official Full Name
    dynein, axonemal, light chain 1 L homeolog
    Primary source
    Xenbase:XB-GENE-983797
    Locus tag
    XELAEV_18039872mg
    See related
    EnsemblRapid:ENSXLAG00005033907
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    dnal1
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 8L
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (97419858..97438276)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (82743935..82762556)

    Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene HAUS augmin like complex subunit 2 L homeolog Neighboring gene leucine rich repeat containing 57 L homeolog Neighboring gene mitotic deacetylase associated SANT domain protein L homeolog Neighboring gene transmembrane protein 62 L homeolog

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification and analysis of axonemal dynein light chain 1 in primary ciliary dyskinesia patients. Horváth J, et al. Am J Respir Cell Mol Biol, 2005 Jul. PMID 15845866
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables alpha-tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables dynein heavy chain binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within outer dynein arm assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of dynein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    dynein axonemal light chain 1; dynein light chain 1, axonemal
    Names
    axonemal dynein light chain 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001094484.1 → NP_001087953.1  dynein axonemal light chain 1

      See identical proteins and their annotated locations for NP_001087953.1

      Status: PROVISIONAL

      Source sequence(s)
      BC082218
      UniProtKB/Swiss-Prot
      Q641R9
      UniProtKB/TrEMBL
      A0A974C9F6
      Related
      ENSXLAP00005101291.1, ENSXLAT00005103267.1
      Conserved Domains (4) summary
      sd00031
      Location:50 → 71
      LRR_1; leucine-rich repeat [structural motif]
      sd00035
      Location:141 → 172
      LRR_NTF; leucine-rich repeat [structural motif]
      pfam12799
      Location:49 → 89
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:72 → 127
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      97419858..97438276
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018229089.2 → XP_018084578.1  dynein light chain 1, axonemal isoform X1

      UniProtKB/TrEMBL
      A0A8J0TF43
      Related
      ENSXLAP00005101259.1, ENSXLAT00005103235.1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q641R9.1 GenPept UniProtKB/Swiss-Prot:Q641R9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.