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    INTS6L integrator complex subunit 6 like [ Canis lupus familiaris (dog) ]

    Gene ID: 492161, updated on 5-Mar-2024

    Summary

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    Official Symbol
    INTS6Lprovided by VGNC
    Official Full Name
    integrator complex subunit 6 likeprovided by VGNC
    Primary source
    VGNC:VGNC:42055
    See related
    Ensembl:ENSCAFG00845026203
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: X
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (107963651..108049825)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (91828623..91914594)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (106707411..106793578)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (105278823..105364953)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (107235721..107321866)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene small integral membrane protein 10 like 2A Neighboring gene spliceosome-associated protein CWC15 homolog Neighboring gene cancer/testis antigen family 45 member A8-like Neighboring gene cancer/testis antigen family 45 member A8-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in snRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of integrator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    integrator complex subunit 6 like; integrator complex subunit 6-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      107963651..108049825
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038450938.1 → XP_038306866.1  integrator complex subunit 6-like isoform X4

      UniProtKB/TrEMBL
      A0A8I3PNC3, A0A8P0T123
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 90
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:757 → 818
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    2. XM_038450941.1 → XP_038306869.1  integrator complex subunit 6-like isoform X7

      UniProtKB/TrEMBL
      A0A8C0LW80
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    3. XM_038450942.1 → XP_038306870.1  integrator complex subunit 6-like isoform X8

      UniProtKB/TrEMBL
      A0A8C0LW80
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    4. XM_038450943.1 → XP_038306871.1  integrator complex subunit 6-like isoform X9

      UniProtKB/TrEMBL
      A0A8C0LW80
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    5. XM_038450940.1 → XP_038306868.1  integrator complex subunit 6-like isoform X6

      UniProtKB/TrEMBL
      A0A8C0LLP3
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    6. XM_038450935.1 → XP_038306863.1  integrator complex subunit 6-like isoform X1

      UniProtKB/TrEMBL
      A0A8C0LMN3, A0A8C0LRU9, A0A8C0TKH9
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:814 → 875
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    7. XM_038450936.1 → XP_038306864.1  integrator complex subunit 6-like isoform X2

      UniProtKB/TrEMBL
      A0A8C0LLN3, A0A8C0LMN3, A0A8C0Z5R0, A0A8I3PYI7
      Related
      ENSCAFP00845036719.1, ENSCAFT00845046820.1
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:777 → 838
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    8. XM_038450937.1 → XP_038306865.1  integrator complex subunit 6-like isoform X3

      UniProtKB/TrEMBL
      A0A8I3PNC3, A0A8P0T123
      Related
      ENSCAFP00845036307.1, ENSCAFT00845046234.1
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:770 → 831
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    9. XM_038450939.1 → XP_038306867.1  integrator complex subunit 6-like isoform X5

      UniProtKB/TrEMBL
      A0A8I3PXT0, A0A8P0PS10
      Related
      ENSCAFP00845036453.1, ENSCAFT00845046423.1
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:733 → 794
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    RNA

    1. XR_005309568.1 RNA Sequence

    2. XR_005309565.1 RNA Sequence

    3. XR_005309566.1 RNA Sequence

    4. XR_005309567.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      105278823..105364953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038524420.1 → XP_038380348.1  integrator complex subunit 6-like isoform X4

      Conserved Domains (2) summary
      pfam13519
      Location:4 → 90
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:757 → 818
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    2. XM_038524423.1 → XP_038380351.1  integrator complex subunit 6-like isoform X7

      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    3. XM_038524424.1 → XP_038380352.1  integrator complex subunit 6-like isoform X8

      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    4. XM_038524425.1 → XP_038380353.1  integrator complex subunit 6-like isoform X9

      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    5. XM_038524422.1 → XP_038380350.1  integrator complex subunit 6-like isoform X6

      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    6. XM_038524417.1 → XP_038380345.1  integrator complex subunit 6-like isoform X1

      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:814 → 875
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    7. XM_038524418.1 → XP_038380346.1  integrator complex subunit 6-like isoform X2

      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:777 → 838
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    8. XM_038524419.1 → XP_038380347.1  integrator complex subunit 6-like isoform X3

      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:770 → 831
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    9. XM_038524421.1 → XP_038380349.1  integrator complex subunit 6-like isoform X5

      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:733 → 794
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    RNA

    1. XR_005352350.1 RNA Sequence

    2. XR_005352347.1 RNA Sequence

    3. XR_005352348.1 RNA Sequence

    4. XR_005352349.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      107235721..107321866
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038652908.1 → XP_038508836.1  integrator complex subunit 6-like isoform X4

      Conserved Domains (2) summary
      pfam13519
      Location:4 → 90
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:757 → 818
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    2. XM_038652912.1 → XP_038508840.1  integrator complex subunit 6-like isoform X7

      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    3. XM_038652913.1 → XP_038508841.1  integrator complex subunit 6-like isoform X8

      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    4. XM_038652914.1 → XP_038508842.1  integrator complex subunit 6-like isoform X9

      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    5. XM_038652910.1 → XP_038508838.1  integrator complex subunit 6-like isoform X6

      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    6. XM_038652905.1 → XP_038508833.1  integrator complex subunit 6-like isoform X1

      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:814 → 875
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    7. XM_038652906.1 → XP_038508834.1  integrator complex subunit 6-like isoform X2

      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:777 → 838
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    8. XM_038652907.1 → XP_038508835.1  integrator complex subunit 6-like isoform X3

      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:770 → 831
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    9. XM_038652909.1 → XP_038508837.1  integrator complex subunit 6-like isoform X5

      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:733 → 794
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    RNA

    1. XR_005420238.1 RNA Sequence

    2. XR_005420235.1 RNA Sequence

    3. XR_005420236.1 RNA Sequence

    4. XR_005420237.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      106707411..106793578
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038588386.1 → XP_038444314.1  integrator complex subunit 6-like isoform X4

      UniProtKB/TrEMBL
      A0A8I3PNC3, A0A8P0T123
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 90
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:757 → 818
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    2. XM_038588390.1 → XP_038444318.1  integrator complex subunit 6-like isoform X7

      UniProtKB/TrEMBL
      A0A8C0LW80
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    3. XM_038588391.1 → XP_038444319.1  integrator complex subunit 6-like isoform X8

      UniProtKB/TrEMBL
      A0A8C0LW80
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    4. XM_038588392.1 → XP_038444320.1  integrator complex subunit 6-like isoform X9

      UniProtKB/TrEMBL
      A0A8C0LW80
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    5. XM_038588388.1 → XP_038444316.1  integrator complex subunit 6-like isoform X6

      UniProtKB/TrEMBL
      A0A8C0LLP3
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    6. XM_038588383.1 → XP_038444311.1  integrator complex subunit 6-like isoform X1

      UniProtKB/TrEMBL
      A0A8C0LMN3, A0A8C0LRU9, A0A8C0TKH9
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:814 → 875
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    7. XM_038588384.1 → XP_038444312.1  integrator complex subunit 6-like isoform X2

      UniProtKB/TrEMBL
      A0A8C0LLN3, A0A8C0LMN3, A0A8C0Z5R0, A0A8I3PYI7
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:777 → 838
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    8. XM_038588385.1 → XP_038444313.1  integrator complex subunit 6-like isoform X3

      UniProtKB/TrEMBL
      A0A8I3PNC3, A0A8P0T123
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:770 → 831
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    9. XM_038588387.1 → XP_038444315.1  integrator complex subunit 6-like isoform X5

      UniProtKB/TrEMBL
      A0A8I3PXT0, A0A8P0PS10
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:733 → 794
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    RNA

    1. XR_005386455.1 RNA Sequence

    2. XR_005386452.1 RNA Sequence

    3. XR_005386453.1 RNA Sequence

    4. XR_005386454.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      91828623..91914594
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038464337.1 → XP_038320265.1  integrator complex subunit 6-like isoform X4

      UniProtKB/TrEMBL
      A0A8I3PNC3, A0A8P0T123
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 90
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:757 → 818
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    2. XM_038464340.1 → XP_038320268.1  integrator complex subunit 6-like isoform X7

      UniProtKB/TrEMBL
      A0A8C0LW80
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    3. XM_038464341.1 → XP_038320269.1  integrator complex subunit 6-like isoform X8

      UniProtKB/TrEMBL
      A0A8C0LW80
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    4. XM_038464342.1 → XP_038320270.1  integrator complex subunit 6-like isoform X9

      UniProtKB/TrEMBL
      A0A8C0LW80
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    5. XM_038464339.1 → XP_038320267.1  integrator complex subunit 6-like isoform X6

      UniProtKB/TrEMBL
      A0A8C0LLP3
      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    6. XM_022415592.2 → XP_022271300.2  integrator complex subunit 6-like isoform X1

      UniProtKB/TrEMBL
      A0A8C0LMN3, A0A8C0LRU9, A0A8C0TKH9
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:814 → 875
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    7. XM_038464334.1 → XP_038320262.1  integrator complex subunit 6-like isoform X2

      UniProtKB/TrEMBL
      A0A8C0LLN3, A0A8C0LMN3, A0A8C0Z5R0, A0A8I3PYI7
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:777 → 838
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    8. XM_038464336.1 → XP_038320264.1  integrator complex subunit 6-like isoform X3

      UniProtKB/TrEMBL
      A0A8I3PNC3, A0A8P0T123
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:770 → 831
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    9. XM_038464338.1 → XP_038320266.1  integrator complex subunit 6-like isoform X5

      UniProtKB/TrEMBL
      A0A8I3PXT0, A0A8P0PS10
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:733 → 794
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    RNA

    1. XR_005318917.1 RNA Sequence

    2. XR_005318914.1 RNA Sequence

    3. XR_005318915.1 RNA Sequence

    4. XR_005318916.1 RNA Sequence

    Nucleotide Protein
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