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    BCAT1 branched chain amino acid transaminase 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 486633, updated on 11-Apr-2024

    Summary

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    Official Symbol
    BCAT1provided by VGNC
    Official Full Name
    branched chain amino acid transaminase 1provided by VGNC
    Primary source
    VGNC:VGNC:38401
    See related
    Ensembl:ENSCAFG00845013534
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 27
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (22769835..22843576)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (23725637..23832733, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (23897853..24005177, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (22584192..22657415)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (22569213..22676273)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene inositol 1,4,5-triphosphate receptor associated 2 Neighboring gene fatty acid binding protein 4, adipocyte pseudogene Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like Neighboring gene SRY-box transcription factor 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables branched-chain-amino-acid transaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-leucine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in valine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    branched-chain-amino-acid aminotransferase, cytosolic
    Names
    branched chain aminotransferase 1, cytosolic
    XP_005637110.1
    XP_005637111.1
    XP_038294651.1
    XP_038294652.1
    XP_038315836.1
    XP_038369321.1
    XP_038369323.1
    XP_038433006.1
    XP_038433007.1
    XP_038433008.1
    XP_038497120.1
    XP_038497121.1
    XP_038497122.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      22769835..22843576
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038438723.1 → XP_038294651.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X1

      UniProtKB/TrEMBL
      A0A8C0KKK0, A0A8C0P235, A0A8I3NGG8
      Related
      ENSCAFP00845018994.1, ENSCAFT00845024182.1
      Conserved Domains (1) summary
      PRK13357
      Location:45 → 397
      PRK13357; branched-chain amino acid aminotransferase; Provisional

    2. XM_038438724.1 → XP_038294652.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X2

      UniProtKB/TrEMBL
      A0A8C0NWX9, A0A8C0TPN7, A0A8I3NRE6
      Related
      ENSCAFP00845019029.1, ENSCAFT00845024223.1
      Conserved Domains (1) summary
      PRK13357
      Location:32 → 384
      PRK13357; branched-chain amino acid aminotransferase; Provisional

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      22584192..22657415
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038513393.1 → XP_038369321.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X1

      Conserved Domains (1) summary
      PRK13357
      Location:45 → 397
      PRK13357; branched-chain amino acid aminotransferase; Provisional

    2. XM_038513395.1 → XP_038369323.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X2

      Conserved Domains (1) summary
      PRK13357
      Location:32 → 384
      PRK13357; branched-chain amino acid aminotransferase; Provisional

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      22569213..22676273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038641193.1 → XP_038497121.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X3

    2. XM_038641192.1 → XP_038497120.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X1

      Conserved Domains (1) summary
      PRK13357
      Location:45 → 397
      PRK13357; branched-chain amino acid aminotransferase; Provisional

    3. XM_038641194.1 → XP_038497122.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X2

      Conserved Domains (1) summary
      PRK13357
      Location:32 → 384
      PRK13357; branched-chain amino acid aminotransferase; Provisional

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      23897853..24005177 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577079.1 → XP_038433007.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X4

      UniProtKB/TrEMBL
      A0A8C0TID7, A0A8C0TPR8, A0A8I3NGH8

    2. XM_038577078.1 → XP_038433006.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X1

      UniProtKB/TrEMBL
      A0A8C0KKK0, A0A8C0P235, A0A8I3NGG8
      Conserved Domains (1) summary
      PRK13357
      Location:45 → 397
      PRK13357; branched-chain amino acid aminotransferase; Provisional

    3. XM_038577080.1 → XP_038433008.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X2

      UniProtKB/TrEMBL
      A0A8C0NWX9, A0A8C0TPN7, A0A8I3NRE6
      Conserved Domains (1) summary
      PRK13357
      Location:32 → 384
      PRK13357; branched-chain amino acid aminotransferase; Provisional

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      23725637..23832733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005637053.4 → XP_005637110.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X5

      UniProtKB/TrEMBL
      A0A8C0TID7, A0A8C0TPR8, A0A8I3NGH8
      Conserved Domains (1) summary
      cl25388
      Location:33 → 385
      PRK13357; branched-chain amino acid aminotransferase; Provisional

    2. XM_038459908.1 → XP_038315836.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X1

      UniProtKB/TrEMBL
      A0A8C0KKK0, A0A8C0P235, A0A8I3NGG8
      Conserved Domains (1) summary
      PRK13357
      Location:45 → 397
      PRK13357; branched-chain amino acid aminotransferase; Provisional

    3. XM_005637054.4 → XP_005637111.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X2

      UniProtKB/TrEMBL
      A0A8C0NWX9, A0A8C0TPN7, A0A8I3NRE6
      Conserved Domains (1) summary
      PRK13357
      Location:32 → 384
      PRK13357; branched-chain amino acid aminotransferase; Provisional
    Nucleotide Protein
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