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    INTS9 integrator complex subunit 9 [ Canis lupus familiaris (dog) ]

    Gene ID: 486090, updated on 5-Mar-2024

    Summary

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    Official Symbol
    INTS9provided by VGNC
    Official Full Name
    integrator complex subunit 9provided by VGNC
    Primary source
    VGNC:VGNC:42058
    See related
    Ensembl:ENSCAFG00845021872
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 25
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (28835218..28935751)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (29327374..29428497)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (28842816..28944349)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (28795031..28896165)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (28680435..28781769)

    Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene homeobox containing 1 Neighboring gene uncharacterized LOC111092294 Neighboring gene uncharacterized LOC119865939 Neighboring gene exostosin like glycosyltransferase 3 Neighboring gene U2 spliceosomal RNA Neighboring gene frizzled class receptor 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in snRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of integrator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    integrator complex subunit 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051829.1 Reference ROS_Cfam_1.0

      Range
      28835218..28935751
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038435283.1 → XP_038291211.1  integrator complex subunit 9 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KGV3, A0A8C0TK02, A0A8I3PIF7
      Related
      ENSCAFP00845030331.1, ENSCAFT00845038736.1
      Conserved Domains (2) summary
      smart01027
      Location:286 → 404
      Beta-Casp; Beta-Casp domain
      cd16294
      Location:1 → 244
      Int9-like_MBL-fold; integrator subunit 9, and related proteins; MBL-fold metallo-hydrolase domain

    2. XM_038435282.1 → XP_038291210.1  integrator complex subunit 9 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KHA2, A0A8C0PFI9, A0A8I3PDL6
      Related
      ENSCAFP00845030224.1, ENSCAFT00845038608.1
      Conserved Domains (2) summary
      smart01027
      Location:307 → 425
      Beta-Casp; Beta-Casp domain
      cd16294
      Location:1 → 265
      Int9-like_MBL-fold; integrator subunit 9, and related proteins; MBL-fold metallo-hydrolase domain

    3. XM_038435285.1 → XP_038291213.1  integrator complex subunit 9 isoform X3

      Conserved Domains (2) summary
      smart01027
      Location:283 → 401
      Beta-Casp; Beta-Casp domain
      cl23716
      Location:60 → 241
      metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049285.1 Alternate UMICH_Zoey_3.1

      Range
      28795031..28896165
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038510229.1 → XP_038366157.1  integrator complex subunit 9 isoform X2

      Conserved Domains (2) summary
      smart01027
      Location:286 → 404
      Beta-Casp; Beta-Casp domain
      cd16294
      Location:1 → 244
      Int9-like_MBL-fold; integrator subunit 9, and related proteins; MBL-fold metallo-hydrolase domain

    2. XM_038510228.1 → XP_038366156.1  integrator complex subunit 9 isoform X1

      Conserved Domains (2) summary
      smart01027
      Location:307 → 425
      Beta-Casp; Beta-Casp domain
      cd16294
      Location:1 → 265
      Int9-like_MBL-fold; integrator subunit 9, and related proteins; MBL-fold metallo-hydrolase domain

    3. XM_038510230.1 → XP_038366158.1  integrator complex subunit 9 isoform X3

      Conserved Domains (2) summary
      smart01027
      Location:283 → 401
      Beta-Casp; Beta-Casp domain
      cl23716
      Location:60 → 241
      metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

      Range
      28680435..28781769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038637992.1 → XP_038493920.1  integrator complex subunit 9 isoform X2

    2. XM_038637991.1 → XP_038493919.1  integrator complex subunit 9 isoform X1

    3. XM_038637993.1 → XP_038493921.1  integrator complex subunit 9 isoform X3

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

      Range
      28842816..28944349
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038573686.1 → XP_038429614.1  integrator complex subunit 9 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KGV3, A0A8C0TK02, A0A8I3PIF7
      Conserved Domains (2) summary
      smart01027
      Location:286 → 404
      Beta-Casp; Beta-Casp domain
      cd16294
      Location:1 → 244
      Int9-like_MBL-fold; integrator subunit 9, and related proteins; MBL-fold metallo-hydrolase domain

    2. XM_038573685.1 → XP_038429613.1  integrator complex subunit 9 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KHA2, A0A8C0PFI9, A0A8I3PDL6
      Conserved Domains (2) summary
      smart01027
      Location:307 → 425
      Beta-Casp; Beta-Casp domain
      cd16294
      Location:1 → 265
      Int9-like_MBL-fold; integrator subunit 9, and related proteins; MBL-fold metallo-hydrolase domain

    3. XM_038573687.1 → XP_038429615.1  integrator complex subunit 9 isoform X3

      Conserved Domains (2) summary
      smart01027
      Location:283 → 401
      Beta-Casp; Beta-Casp domain
      cl23716
      Location:60 → 241
      metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      29327374..29428497
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022409729.2 → XP_022265437.1  integrator complex subunit 9 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KGV3, A0A8C0TK02, A0A8I3PIF7
      Conserved Domains (2) summary
      smart01027
      Location:286 → 404
      Beta-Casp; Beta-Casp domain
      cd16294
      Location:1 → 244
      Int9-like_MBL-fold; integrator subunit 9, and related proteins; MBL-fold metallo-hydrolase domain

    2. XM_543216.7 → XP_543216.2  integrator complex subunit 9 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KHA2, A0A8C0PFI9, A0A8I3PDL6
      Conserved Domains (2) summary
      smart01027
      Location:307 → 425
      Beta-Casp; Beta-Casp domain
      cd16294
      Location:1 → 265
      Int9-like_MBL-fold; integrator subunit 9, and related proteins; MBL-fold metallo-hydrolase domain

    3. XM_014107576.3 → XP_013963051.1  integrator complex subunit 9 isoform X3

      Conserved Domains (2) summary
      smart01027
      Location:283 → 401
      Beta-Casp; Beta-Casp domain
      cl23716
      Location:60 → 241
      metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain
    Nucleotide Protein
    Heading Accession and Version

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