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    CDO1 cysteine dioxygenase type 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 474637, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CDO1provided by VGNC
    Official Full Name
    cysteine dioxygenase type 1provided by VGNC
    Primary source
    VGNC:VGNC:39075
    See related
    Ensembl:ENSCAFG00845005340
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CDO1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 11 NC_051815.1 (5504785..5516418, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 11 NC_006593.4 (5663614..5675242, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 11 NC_049232.1 (5783374..5794991, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 11 NC_049271.1 (5459998..5471611, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 11 NC_049752.1 (5531165..5542773, complement)

    Chromosome 11 - NC_051815.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097988 Neighboring gene cytochrome c oxidase subunit NDUFA4-like Neighboring gene uncharacterized LOC111097989 Neighboring gene autophagy related 12 Neighboring gene non-histone chromosomal protein HMG-17-like Neighboring gene adaptor related protein complex 3 subunit sigma 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ferrous iron binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-cysteine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cysteine dioxygenase type 1
    Names
    cysteine dioxygenase, type I
    XP_005626384.1
    XP_038345729.1
    XP_038407773.1
    XP_038471661.1
    XP_038537128.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051815.1 Reference ROS_Cfam_1.0

      Range
      5504785..5516418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038681200.1 → XP_038537128.1  cysteine dioxygenase type 1

      UniProtKB/TrEMBL
      A0A8C0JRY7, A0A8C0PJC2, A0A8I3MNS9
      Related
      ENSCAFP00845007425.1, ENSCAFT00845009500.1
      Conserved Domains (1) summary
      pfam05995
      Location:2 → 170
      CDO_I; Cysteine dioxygenase type I

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049271.1 Alternate UMICH_Zoey_3.1

      Range
      5459998..5471611 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038489801.1 → XP_038345729.1  cysteine dioxygenase type 1

      Conserved Domains (1) summary
      pfam05995
      Location:2 → 170
      CDO_I; Cysteine dioxygenase type I

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049752.1 Alternate UNSW_CanFamBas_1.0

      Range
      5531165..5542773 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038615733.1 → XP_038471661.1  cysteine dioxygenase type 1

      Conserved Domains (1) summary
      pfam05995
      Location:2 → 170
      CDO_I; Cysteine dioxygenase type I

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049232.1 Alternate UU_Cfam_GSD_1.0

      Range
      5783374..5794991 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038551845.1 → XP_038407773.1  cysteine dioxygenase type 1

      UniProtKB/TrEMBL
      A0A8C0JRY7, A0A8C0PJC2, A0A8I3MNS9
      Conserved Domains (1) summary
      pfam05995
      Location:2 → 170
      CDO_I; Cysteine dioxygenase type I

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006593.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      5663614..5675242 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005626327.4 → XP_005626384.1  cysteine dioxygenase type 1

      UniProtKB/TrEMBL
      A0A8C0JRY7, A0A8C0PJC2, A0A8I3MNS9
      Conserved Domains (1) summary
      pfam05995
      Location:2 → 170
      CDO_I; Cysteine dioxygenase type I
    Nucleotide Protein
    Heading Accession and Version

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