U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    DDX47 DEAD-box helicase 47 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 465298, updated on 29-Mar-2024

    Summary

    Official Symbol
    DDX47provided by VGNC
    Official Full Name
    DEAD-box helicase 47provided by VGNC
    Primary source
    VGNC:VGNC:13395
    Locus tag
    CK820_G0019219
    See related
    Ensembl:ENSPTRG00000033743
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 12
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (19963946..19980563)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (18622305..18638920)

    Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase inhibitor 1B Neighboring gene apolipoprotein L domain containing 1 Neighboring gene microRNA mir-613 Neighboring gene uncharacterized LOC134807465 Neighboring gene large ribosomal subunit protein eL43-like

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    probable ATP-dependent RNA helicase DDX47
    Names
    DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
    apolipoprotein-L domain-containing protein 1
    NP_001233477.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001246548.1NP_001233477.1  probable ATP-dependent RNA helicase DDX47

      See identical proteins and their annotated locations for NP_001233477.1

      Status: PROVISIONAL

      Source sequence(s)
      AK305932
      UniProtKB/TrEMBL
      A0A2I3TIC8, A0A2J8QQC5, A0A2J8QQC6, A0A6D2X359, A0A6D2XGH9, G2HGR8
      Related
      ENSPTRP00000058198.1, ENSPTRT00000066617.2
      Conserved Domains (1) summary
      COG0513
      Location:5428
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      19963946..19980563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)