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    TECPR1 tectonin beta-propeller repeat containing 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 463557, updated on 3-Apr-2024

    Summary

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    Official Symbol
    TECPR1provided by VGNC
    Official Full Name
    tectonin beta-propeller repeat containing 1provided by VGNC
    Primary source
    VGNC:VGNC:4531
    Locus tag
    CK820_G0047426
    See related
    Ensembl:ENSPTRG00000028478 Ensembl:ENSPTRG00000044396
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See TECPR1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (107603768..107640938, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (103951245..103988356, complement)

    Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene oncomodulin 2 Neighboring gene lemur tyrosine kinase 2 Neighboring gene basic helix-loop-helix family member a15 Neighboring gene BAR/IMD domain containing adaptor protein 2 like 1 Neighboring gene brain protein I3 Neighboring gene small ribosomal subunit protein eS1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagosome maturation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in autophagosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tectonin beta-propeller repeat-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      107603768..107640938 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016945057.4 → XP_016800546.2  tectonin beta-propeller repeat-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A2J8Q065, A0A803KKW9, H2R548, K7AA24
      Conserved Domains (5) summary
      smart00694
      Location:888 → 921
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:64 → 125
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:327 → 361
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:604 → 724
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1
      pfam06462
      Location:303 → 331
      Hyd_WA; Propeller

    2. XM_063815471.1 → XP_063671541.1  tectonin beta-propeller repeat-containing protein 1 isoform X2

    3. XM_001135658.6 → XP_001135658.3  tectonin beta-propeller repeat-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A2J8Q065, A0A803KKW9, H2R548, K7AA24
      Conserved Domains (5) summary
      smart00694
      Location:888 → 921
      DysFC; Dysferlin domain, C-terminal region
      smart00693
      Location:64 → 125
      DysFN; Dysferlin domain, N-terminal region
      smart00706
      Location:327 → 361
      TECPR; Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins
      cd13300
      Location:604 → 724
      PH1_TECPR1; Tectonin beta-propeller repeat-containing protein 1 Pleckstrin homology (PH) domain, repeat 1
      pfam06462
      Location:303 → 331
      Hyd_WA; Propeller

    4. XM_063815472.1 → XP_063671542.1  tectonin beta-propeller repeat-containing protein 1 isoform X3

    5. XM_054655998.2 → XP_054511973.1  tectonin beta-propeller repeat-containing protein 1 isoform X4

    6. XM_016945058.4 → XP_016800547.1  tectonin beta-propeller repeat-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      H2R548

    RNA

    1. XR_010158911.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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