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    ARL13B ADP ribosylation factor like GTPase 13B [ Pan troglodytes (chimpanzee) ]

    Gene ID: 460534, updated on 29-Mar-2024

    Summary

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    Official Symbol
    ARL13Bprovided by VGNC
    Official Full Name
    ADP ribosylation factor like GTPase 13Bprovided by VGNC
    Primary source
    VGNC:VGNC:6164
    Locus tag
    CK820_G0016443
    See related
    Ensembl:ENSPTRG00000015129
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See ARL13B in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (97250345..97325881)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (97159730..97237883)

    Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene protein S Neighboring gene U6 spliceosomal RNA Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene syntaxin 19 Neighboring gene histone-binding protein RBBP4-like Neighboring gene dihydrofolate reductase 2 Neighboring gene NOP2/Sun RNA methyltransferase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in non-motile cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in receptor localization to non-motile cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ciliary membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in motile cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in non-motile cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor-like protein 13B
    Names
    ADP-ribosylation factor-like 13B
    ADP-ribosylation factor-like 2-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      97250345..97325881
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001137759.7 → XP_001137759.1  ADP-ribosylation factor-like protein 13B isoform X2

      See identical proteins and their annotated locations for XP_001137759.1

      UniProtKB/TrEMBL
      A0A2J8MY86, A0A6D2WIF4, H2QMY9
      Related
      ENSPTRP00000026120.5
      Conserved Domains (2) summary
      cd04161
      Location:23 → 189
      Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13
      PRK10811
      Location:198 → 259
      rne; ribonuclease E; Reviewed

    2. XM_024355579.3 → XP_024211347.1  ADP-ribosylation factor-like protein 13B isoform X5

      UniProtKB/TrEMBL
      A0A2I3RQQ7
      Conserved Domains (2) summary
      cd04161
      Location:23 → 189
      Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13
      cl26557
      Location:198 → 259
      RNase_E_G; Ribonuclease E/G family

    3. XM_054680825.2 → XP_054536800.1  ADP-ribosylation factor-like protein 13B isoform X8

      UniProtKB/TrEMBL
      A0A2I3RTI9, A0A2J8MY75, A0A6D2XJX1

    4. XM_063806922.1 → XP_063662992.1  ADP-ribosylation factor-like protein 13B isoform X3

    5. XM_024355580.3 → XP_024211348.1  ADP-ribosylation factor-like protein 13B isoform X6

      Conserved Domains (2) summary
      cd04161
      Location:1 → 164
      Arl2l1_Arl13_like; Arl2-like protein 1 (Arl2l1) and Arl13
      cl26557
      Location:173 → 234
      RNase_E_G; Ribonuclease E/G family

    6. XM_003309901.6 → XP_003309949.1  ADP-ribosylation factor-like protein 13B isoform X7

      See identical proteins and their annotated locations for XP_003309949.1

      UniProtKB/TrEMBL
      A0A2J8MY71
      Related
      ENSPTRP00000067627.1
      Conserved Domains (2) summary
      PRK10811
      Location:95 → 156
      rne; ribonuclease E; Reviewed
      cl38936
      Location:1 → 86
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    7. XM_063806923.1 → XP_063662993.1  ADP-ribosylation factor-like protein 13B isoform X3

    8. XM_054680824.2 → XP_054536799.1  ADP-ribosylation factor-like protein 13B isoform X4

    9. XM_054680822.2 → XP_054536797.1  ADP-ribosylation factor-like protein 13B isoform X1

    Nucleotide Protein
    Heading Accession and Version

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