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    ZEB2 zinc finger E-box binding homeobox 2 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 459644, updated on 3-Apr-2024

    Summary

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    Official Symbol
    ZEB2provided by VGNC
    Official Full Name
    zinc finger E-box binding homeobox 2provided by VGNC
    Primary source
    VGNC:VGNC:3882
    Locus tag
    CK820_G0001161
    See related
    Ensembl:ENSPTRG00000012513
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    ZFHX1B
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2B
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 13 NC_072411.2 (46431419..46563577, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2B NC_072400.1 (46428866..46563899, complement)

    Chromosome 13 - NC_072411.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129143411 Neighboring gene glycosyltransferase like domain containing 1 Neighboring gene uncharacterized LOC107973784 Neighboring gene putative uncharacterized protein encoded by LINC00269 Neighboring gene uncharacterized LOC134807980 Neighboring gene uncharacterized LOC107973786 Neighboring gene epsilon-sarcoglycan-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger E-box-binding homeobox 2
    Names
    zinc finger homeobox 1b

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072411.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      46431419..46563577 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001158061.5 → XP_001158061.1  zinc finger E-box-binding homeobox 2 isoform X2

      See identical proteins and their annotated locations for XP_001158061.1

      UniProtKB/TrEMBL
      A0A2J8PP70, A0A2J8PP72, A0A6D2WSS1, K7DLP9
      Related
      ENSPTRP00000081804.1
      Conserved Domains (4) summary
      cd00086
      Location:629 → 671
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00017
      Location:977 → 997
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:258 → 280
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:272 → 295
      zf-H2C2_2; Zinc-finger double domain

    2. XM_001158120.6 → XP_001158120.1  zinc finger E-box-binding homeobox 2 isoform X1

      See identical proteins and their annotated locations for XP_001158120.1

      UniProtKB/TrEMBL
      A0A2J8PP60, A0A2J8PP70, A0A6D2XP98, H2QIS9
      Related
      ENSPTRP00000021403.3
      Conserved Domains (4) summary
      cd00086
      Location:653 → 695
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00017
      Location:1001 → 1021
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:282 → 304
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:296 → 319
      zf-H2C2_2; Zinc-finger double domain

    3. XM_063790477.1 → XP_063646547.1  zinc finger E-box-binding homeobox 2 isoform X2

      UniProtKB/TrEMBL
      A0A2J8PP72, A0A6D2WSS1, K7DLP9

    4. XM_009443431.5 → XP_009441706.1  zinc finger E-box-binding homeobox 2 isoform X1

      See identical proteins and their annotated locations for XP_009441706.1

      UniProtKB/TrEMBL
      A0A2J8PP60, A0A2J8PP70, A0A6D2XP98, H2QIS9
      Related
      ENSPTRP00000066657.1
      Conserved Domains (4) summary
      cd00086
      Location:653 → 695
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00017
      Location:1001 → 1021
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:282 → 304
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:296 → 319
      zf-H2C2_2; Zinc-finger double domain

    5. XM_009443432.5 → XP_009441707.1  zinc finger E-box-binding homeobox 2 isoform X1

      See identical proteins and their annotated locations for XP_009441707.1

      UniProtKB/TrEMBL
      A0A2J8PP60, A0A2J8PP70, A0A6D2XP98, H2QIS9
      Related
      ENSPTRP00000093413.1
      Conserved Domains (4) summary
      cd00086
      Location:653 → 695
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00017
      Location:1001 → 1021
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:282 → 304
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:296 → 319
      zf-H2C2_2; Zinc-finger double domain

    6. XM_063790478.1 → XP_063646548.1  zinc finger E-box-binding homeobox 2 isoform X3

      UniProtKB/TrEMBL
      A0A2I3T640, A0A2J8PP67, A0A6D2WKA6
    Nucleotide Protein
    Heading Accession and Version

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