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    REG3A regenerating family member 3 alpha [ Pan troglodytes (chimpanzee) ]

    Gene ID: 459349, updated on 29-Mar-2024

    Summary

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    Official Symbol
    REG3Aprovided by VGNC
    Official Full Name
    regenerating family member 3 alphaprovided by VGNC
    Primary source
    VGNC:VGNC:6402
    Locus tag
    CK820_G0032417
    See related
    Ensembl:ENSPTRG00000012116
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
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    Genomic context

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    Location:
    chromosome: 2A
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (43584590..43587933)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (79265324..79268638, complement)

    Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene catenin alpha 2 Neighboring gene U6 spliceosomal RNA Neighboring gene U7 small nuclear RNA Neighboring gene lithostathine-1-beta-like Neighboring gene regenerating family member 1 alpha

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oligosaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peptidoglycan binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in disruption of cell wall in another organism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to peptide hormone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in collagen-containing extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    regenerating islet-derived protein 3-alpha
    Names
    pancreatitis-associated protein
    regenerating islet-derived 3 alpha

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      43584590..43587933
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016948858.4 → XP_016804347.1  regenerating islet-derived protein 3-alpha

      UniProtKB/TrEMBL
      A0A2J8L5B5, A0A6D2WSU3, H2QI82
      Related
      ENSPTRP00000020786.3
      Conserved Domains (1) summary
      cd03594
      Location:40 → 173
      CLECT_REG-1_like; C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2)
    Nucleotide Protein
    Heading Accession and Version

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