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    RABIF RAB interacting factor [ Pan troglodytes (chimpanzee) ]

    Gene ID: 457633, updated on 29-Mar-2024

    Summary

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    Official Symbol
    RABIFprovided by VGNC
    Official Full Name
    RAB interacting factorprovided by VGNC
    Primary source
    VGNC:VGNC:11813
    Locus tag
    CK820_G0012928
    See related
    Ensembl:ENSPTRG00000001860
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (46206628..46215507)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (185106133..185116719, complement)

    Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene adiponectin receptor 1 Neighboring gene kelch like family member 12 Neighboring gene actin, cytoplasmic 2-like Neighboring gene uncharacterized LOC134807021 Neighboring gene tubulin alpha 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in post-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    guanine nucleotide exchange factor MSS4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      46206628..46215507
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009440903.5 → XP_009439178.1  guanine nucleotide exchange factor MSS4

      See identical proteins and their annotated locations for XP_009439178.1

      UniProtKB/TrEMBL
      A0A2J8QWJ7, A0A6D2WTR3, H2Q0X3
      Related
      ENSPTRP00000003113.2
      Conserved Domains (1) summary
      cd00246
      Location:19 → 123
      RabGEF; Nucleotide exchange factor for Rab-like small GTPases (RabGEF), Mss4 type; RabGEF positely regulates the function of Rab GTPase by promoting exchange of GDP for GTP; members of the Rab subfamily of Ras GTPases are important in vesicular transport;
    Nucleotide Protein
    Heading Accession and Version

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