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    BCAS2 BCAS2 pre-mRNA processing factor [ Pan troglodytes (chimpanzee) ]

    Gene ID: 457143, updated on 29-Mar-2024

    Summary

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    Official Symbol
    BCAS2provided by VGNC
    Official Full Name
    BCAS2 pre-mRNA processing factorprovided by VGNC
    Primary source
    VGNC:VGNC:14799
    Locus tag
    CK820_G0044954
    See related
    Ensembl:ENSPTRG00000001136
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See BCAS2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (111798622..111813164, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (119536580..119550938)

    Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 33 Neighboring gene eukaryotic translation initiation factor 2 subunit 2-like Neighboring gene pyruvate kinase PKM-like Neighboring gene DENN domain containing 2C Neighboring gene adenosine monophosphate deaminase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Prp19 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pre-mRNA-splicing factor SPF27
    Names
    breast carcinoma amplified sequence 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      111798622..111813164 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_513670.6 → XP_513670.1  pre-mRNA-splicing factor SPF27 isoform X2

      See identical proteins and their annotated locations for XP_513670.1

      UniProtKB/TrEMBL
      A0A2J8JRZ5, A0A6D2XJM2, H2PZQ5
      Related
      ENSPTRP00000001951.4
      Conserved Domains (1) summary
      pfam05700
      Location:11 → 214
      BCAS2; Breast carcinoma amplified sequence 2 (BCAS2)

    2. XM_054686146.2 → XP_054542121.1  pre-mRNA-splicing factor SPF27 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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