atp5mc1 ATP synthase membrane subunit c locus 1 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: atp5mc1provided by Xenbase
Official Full Name: ATP synthase membrane subunit c locus 1provided by Xenbase
Primary source: Xenbase:XB-GENE-5907814
See related: Ensembl:ENSXETG00000016655
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: atp5a; atp5g; atp5g1
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	2	NC_030678.2 (146638326..146650679)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	2	NC_030678.1 (143798535..143802375)

Chromosome 2 - NC_030678.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables lipid binding	IEA Inferred from Electronic Annotation more info
enables proton transmembrane transporter activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within monoatomic ion transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within proton motive force-driven ATP synthesis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within proton transmembrane transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial membrane	IEA Inferred from Electronic Annotation more info
part_of proton-transporting ATP synthase complex, coupling factor F(o)	IEA Inferred from Electronic Annotation more info
part_of proton-transporting two-sector ATPase complex, proton-transporting domain	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ATP synthase F(0) complex subunit C2, mitochondrial

Names: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9); ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9); ATP synthase, H+ transporting, mitochondrial Fo complex subunit C1 (subunit 9)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001005112.2 → NP_001005112.1 ATP synthase F(0) complex subunit C2, mitochondrial

See identical proteins and their annotated locations for NP_001005112.1

Status: PROVISIONAL

Source sequence(s)

BC077049

UniProtKB/TrEMBL

A0A6I8PQ94, A0A803J2X4, Q6DEP6

Related

ENSXETP00000102161.1, ENSXETT00000118600.1

Conserved Domains (1) summary

MTH00222
Location:56 → 130

ATP9; ATP synthase F0 subunit 9; Provisional

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

146638326..146650679

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_031895872.1 → XP_031751732.1 ATP synthase F(0) complex subunit C2, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A6I8PQ94, A0A803J2X4, Q6DEP6

Conserved Domains (1) summary

MTH00222
Location:56 → 130

ATP9; ATP synthase F0 subunit 9; Provisional
XM_031895873.1 → XP_031751733.1 ATP synthase F(0) complex subunit C2, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A6I8PQ94, A0A803J2X4, Q6DEP6

Related

ENSXETP00000061829.3, ENSXETT00000063982.3

Conserved Domains (1) summary

MTH00222
Location:56 → 130

ATP9; ATP synthase F0 subunit 9; Provisional