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    ap1m2.L adaptor related protein complex 1 subunit mu 2 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 446701, updated on 11-Apr-2024

    Summary

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    Official Symbol
    ap1m2.L
    Official Full Name
    adaptor related protein complex 1 subunit mu 2 L homeolog
    Primary source
    Xenbase:XB-GENE-946866
    Locus tag
    XELAEV_18019022mg
    See related
    EnsemblRapid:ENSXLAG00005001787
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    ap1m1; ap1m2
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    Genomic context

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    Location:
    chromosome: 3L
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (147710176..147722518, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (131444823..131457511, complement)

    Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene autophagy related 4D, cysteine peptidase L homeolog Neighboring gene KRI1 homolog L homeolog Neighboring gene cyclin-dependent kinase inhibitor 2D L homeolog Neighboring gene solute carrier family 44 (choline transporter), member 2 L homeolog Neighboring gene interleukin enhancer binding factor 3 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Clone Names

    • MGC83665

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables clathrin adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of clathrin adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in clathrin-coated vesicle IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    adaptor related protein complex 1 subunit mu 2 L homeolog
    Names
    adaptor related protein complex 1 mu 2 subunit L homeolog
    adaptor-related protein complex 1, mu 1 subunit
    adaptor-related protein complex 1, mu 2 subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001093397.1 → NP_001086866.1  adaptor related protein complex 1 subunit mu 2 L homeolog

      See identical proteins and their annotated locations for NP_001086866.1

      Status: PROVISIONAL

      Source sequence(s)
      BC077578
      UniProtKB/TrEMBL
      A0A974HU82, Q6DDI4
      Related
      ENSXLAP00005005322.1, ENSXLAT00005005428.1
      Conserved Domains (2) summary
      cl02092
      Location:5 → 139
      Clat_adaptor_s; Clathrin adaptor complex small chain
      cd09259
      Location:154 → 421
      AP-1_Mu1B_Cterm; C-terminal domain of medium Mu1B subunit in epithelial cell-specific clathrin-associated adaptor protein (AP) complex AP-1

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      147710176..147722518 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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