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    mthfsd.L methenyltetrahydrofolate synthetase domain containing L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 446264, updated on 11-Apr-2024

    Summary

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    Official Symbol
    mthfsd.L
    Official Full Name
    methenyltetrahydrofolate synthetase domain containing L homeolog
    Primary source
    Xenbase:XB-GENE-5787620
    Locus tag
    XELAEV_18022673mg
    See related
    EnsemblRapid:ENSXLAG00005026359
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    mthfsd
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    Genomic context

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    Location:
    chromosome: 4L
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (58343048..58356302)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (53131151..53144494)

    Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene GABA(A) receptor-associated protein like 2 L homeolog Neighboring gene lysyl-tRNA synthetase 1 L homeolog Neighboring gene uncharacterized LOC121403022 Neighboring gene forkhead box F1 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    methenyltetrahydrofolate synthase domain-containing protein
    Names
    methenyltetrahydrofolate synthetase domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001092984.1 → NP_001086453.1  methenyltetrahydrofolate synthase domain-containing protein

      See identical proteins and their annotated locations for NP_001086453.1

      Status: PROVISIONAL

      Source sequence(s)
      BC094085
      UniProtKB/Swiss-Prot
      Q52L34, Q6AXA2
      UniProtKB/TrEMBL
      A0A974D4L4
      Related
      ENSXLAP00005078438.1, ENSXLAT00005080029.1
      Conserved Domains (2) summary
      cd12270
      Location:312 → 383
      RRM_MTHFSD; RNA recognition motif in vertebrate methenyltetrahydrofolate synthetase domain-containing proteins
      cl00360
      Location:13 → 210
      5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      58343048..58356302
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018256763.2 → XP_018112252.1  methenyltetrahydrofolate synthase domain-containing protein isoform X1

      UniProtKB/TrEMBL
      A0A8J0UZ79, A0A974D4L4
      Related
      ENSXLAP00005078616.1, ENSXLAT00005080208.1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q52L34.1 GenPept UniProtKB/Swiss-Prot:Q52L34

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.