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    smap2.S small ArfGAP2 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 444489, updated on 11-Apr-2024

    Summary

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    Official Symbol
    smap2.S
    Official Full Name
    small ArfGAP2 S homeolog
    Primary source
    Xenbase:XB-GENE-5817138
    Locus tag
    XELAEV_18015238mg
    See related
    EnsemblRapid:ENSXLAG00005004450
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    smap2; smap2.L
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    Genomic context

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    Location:
    chromosome: 2S
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (79520986..79539336, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (72223045..72241392, complement)

    Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108709588 Neighboring gene nuclear transcription factor Y subunit gamma S homeolog Neighboring gene potassium channel, voltage gated KQT-like subfamily Q, member 4 S homeolog Neighboring gene collagen, type IX, alpha 2 S homeolog Neighboring gene CUB and sushi domain-containing protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC81879

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    small ArfGAP2 S homeolog
    Names
    small ArfGAP2 L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001092591.1 → NP_001086060.1  small ArfGAP2 S homeolog

      See identical proteins and their annotated locations for NP_001086060.1

      Status: PROVISIONAL

      Source sequence(s)
      BC074142
      UniProtKB/TrEMBL
      A0A974DI50, Q6GMC6
      Related
      ENSXLAP00005013302.1, ENSXLAT00005013482.1
      Conserved Domains (1) summary
      pfam01412
      Location:13 → 126
      ArfGap; Putative GTPase activating protein for Arf

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      79520986..79539336 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018248280.2 → XP_018103769.1  small ArfGAP2 S homeolog isoform X1

      UniProtKB/TrEMBL
      A0A1L8H7W2, A0A974DHJ3, Q3B8M6
      Related
      ENSXLAP00005013297.1, ENSXLAT00005013477.1
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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