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    MED22 mediator complex subunit 22 [ Gallus gallus (chicken) ]

    Gene ID: 417159, updated on 5-Mar-2024

    Summary

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    Symbol
    MED22provided by CGNC
    Full Name
    mediator complex subunit 22provided by CGNC
    Primary source
    CGNC:2328
    See related
    Ensembl:ENSGALG00010028857
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SURF5; Surf-5; Surf5b
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 17
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (7465965..7472284, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (6877615..6883934, complement)

    Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 180 Neighboring gene surfeit 6 Neighboring gene small nucleolar RNA SNORD24 Neighboring gene small nucleolar RNA SNORD36 Neighboring gene ribosomal protein L7a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The complete nucleotide sequence of chicken ribosomal protein L7a gene and the multiple factor binding sites in its 5'-flanking region. Maeda N, et al. Biochimie, 1993. PMID 8274530
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mediator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mediator of RNA polymerase II transcription subunit 22
    Names
    surfeit 5
    surfeit locus protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001045830.3 → NP_001039295.1  mediator of RNA polymerase II transcription subunit 22 isoform 3

      See identical proteins and their annotated locations for NP_001039295.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000308
      UniProtKB/TrEMBL
      A0A8V1ALT8
      Related
      ENSGALP00010042929.1, ENSGALT00010069803.1
      Conserved Domains (1) summary
      pfam06179
      Location:20 → 124
      Med22; Surfeit locus protein 5 subunit 22 of Mediator complex

    2. NM_001389417.2 → NP_001376346.1  mediator of RNA polymerase II transcription subunit 22 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000308
      UniProtKB/Swiss-Prot
      Q800L2, Q800L3
      UniProtKB/TrEMBL
      A0A8V1AFQ2
      Conserved Domains (1) summary
      pfam06179
      Location:20 → 124
      Med22; Surfeit locus protein 5 subunit 22 of Mediator complex

    3. NM_001389418.2 → NP_001376347.1  mediator of RNA polymerase II transcription subunit 22 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000308
      UniProtKB/TrEMBL
      A0A8V1AFQ2
      Related
      ENSGALP00010042930.1, ENSGALT00010069804.1
      Conserved Domains (1) summary
      pfam06179
      Location:20 → 124
      Med22; Surfeit locus protein 5 subunit 22 of Mediator complex

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7465965..7472284 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6877615..6883934 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q800L3.1 GenPept UniProtKB/Swiss-Prot:Q800L3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.