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    TMC7 transmembrane channel like 7 [ Gallus gallus (chicken) ]

    Gene ID: 416610, updated on 3-Apr-2024

    Summary

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    Symbol
    TMC7provided by CGNC
    Full Name
    transmembrane channel like 7provided by CGNC
    Primary source
    CGNC:5200
    See related
    Ensembl:ENSGALG00010021032
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 14
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (8493494..8507573, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (8490134..8504216, complement)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417199 Neighboring gene inositol 1,4,5-trisphosphate receptor interacting protein like 2 Neighboring gene coenzyme Q7, hydroxylase Neighboring gene transmembrane channel like 5 Neighboring gene glycerophosphodiester phosphodiesterase 1 Neighboring gene centriolar coiled-coil protein 110 Neighboring gene uncharacterized LOC107054626 Neighboring gene C16orf52 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of chicken transmembrane channel-like (TMC) genes: expression analysis in the cochlea. Mutai H, et al. Neuroscience, 2005. PMID 15857715
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mechanosensitive monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane channel-like protein 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030641.3 → NP_001025812.3  transmembrane channel-like protein 7

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000257
      UniProtKB/TrEMBL
      A0A8V0Z9W5, A0A8V0Z9Y0
      Related
      ENSGALP00010030079.1, ENSGALT00010050888.1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      8493494..8507573 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015294224.4 → XP_015149710.2  transmembrane channel-like protein 7 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z9Y0

    2. XM_025155107.3 → XP_025010875.2  transmembrane channel-like protein 7 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZH16, A0A8V0ZN34
      Related
      ENSGALP00010030087.1, ENSGALT00010050896.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8490134..8504216 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046927462.1 → XP_046783418.1  transmembrane channel-like protein 7 isoform X1

    2. XM_046927463.1 → XP_046783419.1  transmembrane channel-like protein 7 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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