akap13.S A-kinase anchoring protein 13 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: akap13.S
Official Full Name: A-kinase anchoring protein 13 S homeolog
Primary source: Xenbase:XB-GENE-6252298
Locus tag: XELAEV_18020488mg
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: brx; lbc; ha-3; ht31; c-lbc; akap13; akap-lbc; arhgef13; proto-lb; proto-lbc
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Genomic context

Location:: chromosome: 3S

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3S	NC_054376.1 (42627168..42694046)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3S	NC_030729.1 (41443705..41510831)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	Unplaced Scaffold	NW_016739339.1 (1..439)

Chromosome 3S - NC_054376.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables MAP-kinase scaffold activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within adrenergic receptor signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of canonical NF-kappaB signal transduction	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of Rho protein signal transduction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in actin cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: A-kinase anchoring protein 13 S homeolog

Names: A kinase (PRKA) anchor protein 13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091192.1 → NP_001084661.1 A-kinase anchoring protein 13 S homeolog

See identical proteins and their annotated locations for NP_001084661.1

Status: PROVISIONAL

Source sequence(s)

BC068812

UniProtKB/TrEMBL

Q6NTZ0

Conserved Domains (3) summary

cd00204
Location:152 → 214

ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...

pfam12796
Location:152 → 214

Ank_2; Ankyrin repeats (3 copies)

sd00045
Location:162 → 196

ANK; ANK repeat [structural motif]