U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC409851 amphiphysin [ Apis mellifera (honey bee) ]

    Gene ID: 409851, updated on 9-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC409851
    Gene description
    amphiphysin
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    Amph; GB43280
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: LG7
    Exon count:
    9
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG7 NC_037644.1 (7849025..7911946)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG7 NC_007076.3 (5972655..6036605, complement)

    Linkage Group LG7 - NC_037644.1Genomic Context describing neighboring genes Neighboring gene MATH and LRR domain-containing protein PFE0570w Neighboring gene uncharacterized LOC107964773 Neighboring gene acidic leucine-rich nuclear phosphoprotein 32 family member A Neighboring gene uncharacterized LOC102653770 Neighboring gene guanine nucleotide-binding protein G(q) subunit alpha Neighboring gene uridine phosphorylase 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    amphiphysin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037644.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      7849025..7911946
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026441663.1 → XP_026297448.1  amphiphysin isoform X1

      UniProtKB/TrEMBL
      A0A7M7MKS6, A0A8B8H1I2
      Conserved Domains (2) summary
      cd11790
      Location:358 → 421
      SH3_Amphiphysin; Src Homology 3 domain of Amphiphysin and related domains
      cl12013
      Location:26 → 237
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    2. XM_026441664.1 → XP_026297449.1  amphiphysin isoform X2

      UniProtKB/TrEMBL
      A0A7M7MKS8, A0A8B8H320
      Conserved Domains (2) summary
      cd11790
      Location:346 → 409
      SH3_Amphiphysin; Src Homology 3 domain of Amphiphysin and related domains
      cl12013
      Location:26 → 237
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    3. XM_026441665.1 → XP_026297450.1  amphiphysin isoform X3

      UniProtKB/TrEMBL
      A0A7M7MKS7, A0A8B8H0D9
      Conserved Domains (2) summary
      cd11790
      Location:300 → 363
      SH3_Amphiphysin; Src Homology 3 domain of Amphiphysin and related domains
      cl12013
      Location:26 → 237
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    4. XM_026441666.1 → XP_026297451.1  amphiphysin isoform X4

      UniProtKB/TrEMBL
      A0A7M7MKR9, A0A8B8H0E4
      Conserved Domains (2) summary
      cd11790
      Location:288 → 351
      SH3_Amphiphysin; Src Homology 3 domain of Amphiphysin and related domains
      cl12013
      Location:26 → 237
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Miscellaneous